Evidence map›Paper›PMID 36377961›Full record

ArticleMicrobiology spectrum2022

Tracing Foodborne Botulism Events Caused by Clostridium botulinum in Xinjiang Province, China, Using a Core Genome Sequence Typing Scheme.

Xin Ma, Kexin Li, Fang Li, Jing Su, Weiwei Meng, Yanming Sun, Hui Sun, Jiazheng Sun, Yonghe Yuan, Yujia Lin and 3 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Genomic Characterization ofChina CDC weekly · 2026
    Article
  4. Article
  5. Detection of a streptogramin A O-acetyltransferase gene (Applied and environmental microbiology · 2025
    Article
  6. Foodborne Botulism Caused byMicroorganisms · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Xin Ma *Center for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Kexin Li *State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Fang LiCenter for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Jing SuCenter for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Weiwei MengCenter for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Yanming SunSchool of Engineering Medicine, Beihang University, Beijing, China.
Hui SunState Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, China.
Jiazheng SunCriminal Investigation School, People's Public Security University of China, Beijing, China.
Yonghe YuanCenter for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Yujia LinCenter for Disease Control and Prevention of Xinjiang Uygur Autonomous Region, Urumqi, China.
Songnian HuState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Xuefang XuState Key Laboratory for Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, China.ORCID 0000-0002-2855-3390
Zilong HeSchool of Engineering Medicine, Beihang University, Beijing, China.
Xinjiang Uygur Autonomous Region Disease Prevention and Control Center · CNBeihang University · CNChinese Academy of Sciences · CNChinese Center For Disease Control and Prevention · CNChina People's Public Security University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Foodborne botulism is a rare but life-threatening illness resulting from the action of a potent toxin mainly produced by Clostridium botulinum. It grows in an oxygen-deficient environment and is extremely viable in meat and soy products, making it one of the most virulent bacteria. How to track foodborne botulism events quickly and accurately has become a key issue. Here, we investigated two foodborne botulism events that occurred in Xinjiang in 2019 based on whole-genome sequencing and also successfully traced the relationship between clinical and food C. botulinum isolates using whole-genome core gene markers. All 59 isolates were classified as group I strains. Of the strains isolated in this study, 44 were found to be botulinum toxin A(B), and 15 isolates contained only the toxin B locus. Both the toxin A and B gene segments were located on the chromosome and organized in an ha cluster. Antibiotic resistance and virulence factors were also investigated. A set of 329 universal core gene markers were established using C. botulinum strains from a public database. These core gene markers were applied to the published C. botulinum genomes, and three outbreaks were identified. This work demonstrates that universal core gene markers can be used to trace foodborne botulism events, and we hope that our work will facilitate this effort in future.

Indexed as

Botulinum Toxins, Type ABotulismClostridium botulinumDisease OutbreaksHumansPhylogenyBotulinum Toxins, Type AClostridium botulinumcore genome markersfoodborne botulismphylogenetic treewhole-genome sequencing

Identifiers

PMID36377961
PMCPMC9769928
OpenAlexW4309048140

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.