Evidence map›Paper›PMID 36373710›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2022

Podocalyxin-Like Protein 1 Regulates Pluripotency through the Cholesterol Biosynthesis Pathway.

Wei-Ju Chen, Wei-Kai Huang, Sarshan R Pather, Wei-Fang Chang, Li-Ying Sung, Han-Chung Wu, Mei-Ying Liao, Chi-Chiu Lee, Hsuan-Hui Wu, Chung-Yi Wu and 16 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 10 institutions in 3 countries.

Wei-Ju ChenGenomics Research Center, Academia Sinica, Genome and Systems Biology Degree Program, College of Life Science, National Taiwan University, Taipei, 10617, Taiwan.
Wei-Kai HuangCenter for Genomic Medicine, Massachusetts General Hospital, Boston, MA, 02114, USA.
Sarshan R PatherCell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Wei-Fang ChangInstitute of Biotechnology, National Taiwan University, Taipei, 10617, Taiwan.
Li-Ying SungInstitute of Biotechnology, National Taiwan University, Taipei, 10617, Taiwan.
Han-Chung WuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, 11529, Taiwan.
Mei-Ying LiaoInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, 11529, Taiwan.
Chi-Chiu LeeInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, 11529, Taiwan.
Hsuan-Hui WuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, 11529, Taiwan.
Chung-Yi WuGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Kuo-Shiang LiaoGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chun-Yu LinGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Shang-Chih YangGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Hsuan LinGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Pei-Lun LaiGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chi-Hou NgGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chun-Mei HuGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
I-Chih ChenGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chi-Hsuan ChuangGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Chien-Ying LaiGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Po-Yu LinGenomics Research Center, Academia Sinica, Taipei, 11529, Taiwan.
Yueh-Chang LeeDepartment of Ophthalmology, Hualien Tzu Chi Hospital, Buddhist Tzu Chi Medical Foundation, Hualien, 97004, Taiwan.
Scott C SchuylerDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, Division of Head and Neck Surgery, Department of Otolaryngology, Chang Gung Memorial Hospital, Taoyuan, 33302, Taiwan.
Axel SchambachInstitute of Experimental Hematology, Hannover Medical School, 30625, Hannover, Germany.
Frank Leigh LuDepartment of Pediatrics, National Taiwan University Hospital and National Taiwan University Medical College, Taipei, 10051, Taiwan.
Jean LuGenomics Research Center, Academia Sinica, Genome and Systems Biology Degree Program, College of Life Science, National Taiwan University, Taipei, 10617, Taiwan.ORCID https://orcid.org/0000-0003-2506-2040
Genomics Research Center, Academia Sinica · TWNational Taiwan University · TWInstitute of Biomedical Sciences, Academia Sinica · TWInstitute of Cellular and Organismic Biology, Academia Sinica · TWChang Gung University · TWMassachusetts General Hospital · USMedizinische Hochschule Hannover · DENational Taiwan University Hospital · TWTzu Chi Foundation · TWUniversity of Pennsylvania · US

Funding

Academia Sinica AS-BRPT-110-03Academia Sinica AS-KPQ-109-BioMedAcademia Sinica AS-KPQ-110-BioMedAcademia Sinica AS-SUMMIT-108Academia Sinica AS-SUMMIT-109Academia Sinica Core Facility and Innovative Instrument Project AS-CFII-108-107Academia Sinica Core Facility and Innovative Instrument Project AS-CFII-108-115Chang Gung Memorial Hospital BMRPC59Chang Gung Memorial Hospital CMRP1M0381Chang Gung Memorial Hospital CMRPD1J0123Chang Gung Memorial Hospital CMRPD1K0561Ministry of Science and Technology MOST 107-0210-01-19-0Ministry of Science and Technology MOST 107-2320-B-001-023-)Ministry of Science and Technology MOST 108-2314-B-001-006-MY3Ministry of Science and Technology MOST-108-2811-B-001-581-Ministry of Science and Technology MOST 108-3114-Y-001-002National Health Research Institute NHRI-EX104-10415SINational Health Research Institute NHRI-EX105-10415SINational Health Research Institute NHRI-EX106-10415SINational Science and Technology Council NSTC-111-2314-B-001-013-MY3
6 · The paper itself

Abstract

Deciphering signaling mechanisms critical for the extended pluripotent stem cell (EPSC) state and primed pluripotency is necessary for understanding embryonic development. Here, a membrane protein, podocalyxin-like protein 1 (PODXL) as being essential for extended and primed pluripotency, is identified. Alteration of PODXL expression levels affects self-renewal, protein expression of c-MYC and telomerase, and induced pluripotent stem cell (iPSC) and EPSC colony formation. PODXL is the first membrane protein reported to regulate de novo cholesterol biosynthesis, and human pluripotent stem cells (hPSCs) are more sensitive to cholesterol depletion than fibroblasts. The addition of exogenous cholesterol fully restores PODXL knockdown-mediated loss of pluripotency. PODXL affects lipid raft dynamics via the regulation of cholesterol. PODXL recruits the RAC1/CDC42/actin network to regulate SREBP1 and SREBP2 maturation and lipid raft dynamics. Single-cell RNA sequencing reveals PODXL overexpression enhanced chimerism between human cells in mouse host embryos (hEPSCs 57%). Interestingly, in the human-mouse chimeras, laminin and collagen signaling-related pathways are dominant in PODXL overexpressing cells. It is concluded that cholesterol regulation via PODXL signaling is critical for ESC/EPSC.

Indexed as

cholesterolextended pluripotencyintegrinpodocalyxin-like protein 1 (PODXL)primed stem cells

Identifiers

PMID36373710
PMCPMC9811443
OpenAlexW4308954903

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.