Evidence map›Paper›PMID 36372432›Full record

ArticleMicrobes and environments2022

Novel Cross-domain Symbiosis between Candidatus Patescibacteria and Hydrogenotrophic Methanogenic Archaea Methanospirillum Discovered in a Methanogenic Ecosystem.

Kyohei Kuroda, Kengo Kubota, Shuka Kagemasa, Ryosuke Nakai, Yuga Hirakata, Kyosuke Yamamoto, Masaru K Nobu, Takashi Narihiro

Abstract read
In one paragraph

Article in Microbes and environments, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. International journal of systematic and evolutionary microbiology · 2025
    Article
  5. Article
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  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kyohei KurodaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Kengo KubotaDepartment of Frontier Sciences for Advanced Environment, Graduate School of Environmental Studies, Tohoku University.
Shuka KagemasaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Ryosuke NakaiBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Yuga HirakataBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Kyosuke YamamotoBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Masaru K NobuBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).
Takashi NarihiroBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST).

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To identify novel cross-domain symbiosis between Candidatus Patescibacteria and Archaea, we performed fluorescence in situ hybridization (FISH) on enrichment cultures derived from methanogenic bioreactor sludge with the newly designed 32-520-1066 probe targeting the family-level uncultured clade 32-520/UBA5633 lineage in the class Ca. Paceibacteria. All FISH-detectable 32-520/UBA5633 cells were attached to Methanospirillum, indicating high host specificity. Transmission electron microscopy observations revealed 32-520/UBA5633-like cells that were specifically adherent to the plug structure of Methanospirillum-like rod-shaped cells. The metagenome-assembled genomes of 32-520/UBA5633 encoded unique gene clusters comprising pilin signal peptides and type IV pilins. These results provide novel insights into unseen symbiosis between Ca. Patescibacteria and Archaea.

Indexed as

ArchaeaEuryarchaeotaBacteriaEcosystemIn Situ Hybridization, FluorescenceMethanospirillumPhylogenyRNA, Ribosomal, 16SSymbiosisRNA, Ribosomal, 16S32-520/UBA5633Candidate Phyla Radiation (CPR) superphylumCandidatus Patescibacteriacross-domain symbiosisMethanospirillum

Identifiers

PMID36372432
PMCPMC9763046

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.