Evidence map›Paper›PMID 36370823›Full record

ArticleHuman pathology2023

Alternative lengthening of telomeres in primary hepatic neoplasms.

Saba Yasir, Scott Thompson, Zongming Eric Chen, Ryan Knudson, Darlene Knutson, Sara Kloft-Nelson, Rondell P Graham, Dhanpat Jain, Sanford M Simon, Tsung-Teh Wu and 1 more

Open access · greenAbstract read
In one paragraph

Article in Human pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Saba YasirDepartment of Laboratory Medicine and Pathology, Mayo Clinic Rochester, MN, 55905, USA.
Scott ThompsonDepartment of Radiology, Mayo Clinic Rochester, MN, 55905, USA.
Zongming Eric ChenDepartment of Laboratory Medicine and Pathology, Mayo Clinic Rochester, MN, 55905, USA.
Ryan KnudsonMedical Genome Facility, Cytogenetics Core Laboratory, Mayo Clinic Rochester, MN, 55905, USA.
Darlene KnutsonMedical Genome Facility, Cytogenetics Core Laboratory, Mayo Clinic Rochester, MN, 55905, USA.
Sara Kloft-NelsonMedical Genome Facility, Cytogenetics Core Laboratory, Mayo Clinic Rochester, MN, 55905, USA.
Rondell P GrahamDepartment of Laboratory Medicine and Pathology, Mayo Clinic Rochester, MN, 55905, USA.
Dhanpat JainDepartment Pathology, Yale, CT, 06520, USA.
Sanford M SimonLaboratory of Cellular Biophysics, The Rockefeller University, 1230 York Avenue, NY, NY, 10065, USA.
Tsung-Teh WuDepartment of Laboratory Medicine and Pathology, Mayo Clinic Rochester, MN, 55905, USA.
Michael TorbensonDepartment of Laboratory Medicine and Pathology, Mayo Clinic Rochester, MN, 55905, USA. Electronic address: Torbenson.Michael@mayo.edu.
Mayo Clinic · USMayo Clinic in Arizona · USRockefeller University · USYale University · US

Funding

Project 4: ImmunovirotherapyP50CA210964 · NCI · MAYO CLINIC ROCHESTER · PI Zongming Eric Chen · 2018 to 2026
$20.5M
What differences between the chimeric fusion oncoprotein DNAJB1-PRKACA and native kinase PRKACA lead to transformation in the childhood cancer, fibrolamellar hepatocellular carcinoma?U54CA243126 · NCI · ROCKEFELLER UNIVERSITY · PI SIMON, SANFORD M · 2019 to 2023
$5.4M
NCI NIH HHS P50 CA210964NCI NIH HHS U54 CA243126
6 · The paper itself

Abstract

The alternative lengthening of telomeres (ALT) phenotype is characterized by ultra-bright telomeres on fluorescence in situ hybridization (FISH) and is a marker of a unique mechanism of telomere maintenance in tumors. ALT does not occur in normal tissues. ALT has been described in hepatocellular carcinoma (5-10%) and in primary hepatic angiosarcomas (75%). To study the frequency of ALT in other primary hepatic tumors, a wide range of primary hepatic neoplasms were retrieved. The tumors included the following: intrahepatic and hilar cholangiocarcinomas (N = 110), hepatic adenomas (N = 35), hepatocellular carcinomas (N = 30), fibrolamellar carcinomas (n = 11), combined cholangiocarcinoma-hepatocellular carcinomas (N = 8), carcinosarcoma (N = 10), hepatoblastomas (N = 5), hemangiomas (N = 4), angiosarcomas (N = 8), epithelioid hemangioendotheliomas (N = 10), calcified nested stromal epithelial tumor (N = 2), embryonal sarcoma (N = 2), rhabdoid tumor (N = 1), bile duct adenoma (N = 1), and angiomyolipoma (N = 1). For epithelial tumors, ALT-FISH was positive in one carcinosarcoma (10% of cases), one cholangiocarcinoma (1% of cases), and one combined hepatocellular carcinoma-cholangiocarcinoma (13% of cases). In the hepatocellular carcinoma component of both the carcinosarcoma and the combined hepatocellular carcinoma-cholangiocarcinoma, the tumor cells showed patchy marked nuclear pleomorphism akin to that described previously for chromophobe hepatocellular carcinoma, which are typically ALT FISH positive. The ALT-positive cholangiocarcinoma also showed patchy, striking nuclear pleomorphism. For soft tissue tumors, ALT was positive in two angiosarcomas (N = 2; 25% of cases). In summary, this study shows that ALT-FISH is positive in rare carcinosarcomas, cholangiocarcinomas, and combined cholangiocarcinoma-hepatocellular carcinoma. ALT is not a significant mechanism of telomere maintenance in hepatocellular adenomas or fibrolamellar carcinomas and was negative in all other tested primary hepatic neoplasms. ALT-FISH is also positive in a subset of primary hepatic angiosarcomas.

Indexed as

Bile Duct NeoplasmsCarcinoma, HepatocellularCarcinosarcomaCholangiocarcinomaHemangiosarcomaLiver NeoplasmsBile Ducts, IntrahepaticHumansIn Situ Hybridization, FluorescenceTelomereAlternative lenthening of telomeresAngiosarcomaCarcinosarcomaCholangiocarcinomaCombined hepatocellular carcinoma-cholangiocarcinomaFibrolamellar carcinomaHepatocellular carcinoma

Identifiers

PMID36370823
PMCPMC10756352
OpenAlexW4308740434

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.