Evidence map›Paper›PMID 36369205›Full record

ArticleScientific data2022

The Health Gym: synthetic health-related datasets for the development of reinforcement learning algorithms.

Nicholas I-Hsien Kuo, Mark N Polizzotto, Simon Finfer, Federico Garcia, Anders Sönnerborg, Maurizio Zazzi, Michael Böhm, Rolf Kaiser, Louisa Jorm, Sebastiano Barbieri

Abstract readDataset
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  6. Attention-based Imputation of Missing Values in Electronic Health Records Tabular Data.Proceedings. IEEE International Conference on Healthcare Informatics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Nicholas I-Hsien KuoCentre for Big Data Research in Health, University of New South Wales, Sydney, Australia. n.kuo@unsw.edu.au.
Mark N PolizzottoAustralian National University, Canberra, Australia.
Simon FinferThe George Institute for Global Health, Sydney, Australia.
Federico GarciaHospital Universitario San Cecilio, Granada, Spain.ORCID 0000-0001-7611-781X
Anders SönnerborgKarolinska Institutet, Stockholm, Sweden.
Maurizio ZazziUniversità degli Studi di Siena, Siena, Italy.
Michael BöhmUniklinik Köln, Universität zu Köln, Cologne, Germany.
Rolf KaiserUniklinik Köln, Universität zu Köln, Cologne, Germany.
Louisa JormCentre for Big Data Research in Health, University of New South Wales, Sydney, Australia.
Sebastiano BarbieriCentre for Big Data Research in Health, University of New South Wales, Sydney, Australia.ORCID 0000-0002-5919-372X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, the machine learning research community has benefited tremendously from the availability of openly accessible benchmark datasets. Clinical data are usually not openly available due to their confidential nature. This has hampered the development of reproducible and generalisable machine learning applications in health care. Here we introduce the Health Gym - a growing collection of highly realistic synthetic medical datasets that can be freely accessed to prototype, evaluate, and compare machine learning algorithms, with a specific focus on reinforcement learning. The three synthetic datasets described in this paper present patient cohorts with acute hypotension and sepsis in the intensive care unit, and people with human immunodeficiency virus (HIV) receiving antiretroviral therapy. The datasets were created using a novel generative adversarial network (GAN). The distributions of variables, and correlations between variables and trends in variables over time in the synthetic datasets mirror those in the real datasets. Furthermore, the risk of sensitive information disclosure associated with the public distribution of the synthetic datasets is estimated to be very low.

Indexed as

AlgorithmsComprehensive Health CareMachine LearningHumans

Identifiers

PMID36369205
PMCPMC9652426

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.