Evidence map›Paper›PMID 36367850›Full record

ArticlePloS one2022

The use of integrated text mining and protein-protein interaction approach to evaluate the effects of combined chemotherapeutic and chemopreventive agents in cancer therapy.

Mohammad Rasoul Samandari Bahraseman, Babak Khorsand, Keyvan Esmaeilzadeh-Salestani, Solmaz Sarhadi, Nima Hatami, Banafsheh Khaleghdoust, Evelin Loit

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
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  3. Article
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  7. Iranian journal of pharmaceutical research : IJPR
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Mohammad Rasoul Samandari BahrasemanFaculty of Sciences, Department of Biology, Shahid Bahonar University of Kerman, Kerman, Iran.ORCID 0000-0002-1032-0310
Babak KhorsandComputer Engineering Department, Ferdowsi University of Mashhad, Mashhad, Iran.
Keyvan Esmaeilzadeh-SalestaniChair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi, Tartu, Estonia.ORCID 0000-0002-6882-7616
Solmaz SarhadiVarjavand Kesht Kariman, Limited Liability Company, Kerman, Iran.
Nima HatamiKerman Department of Endodontic Dentistry, Kerman University of Medical Sciences, Kerman, Iran.
Banafsheh KhaleghdoustChair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi, Tartu, Estonia.
Evelin LoitChair of Crop Science and Plant Biology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi, Tartu, Estonia.
Estonian University of Life Sciences · EEFerdowsi University of Mashhad · IRKerman University of Medical Sciences · IRShahid Bahonar University of Kerman · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Combining chemotherapeutic (CT) and chemopreventive (CP) agents for cancer treatment is controversial, and the issue has not yet been conclusively resolved. In this study, by integrating text mining and protein-protein interaction (PPI), the combined effects of these two kinds of agents in cancer treatment were investigated. First, text mining was performed by the Pathway Studio database to study the effects of various agents (CP and CT) on cancer-related processes. Then, each group's most important hub genes were obtained by calculating different centralities. Finally, the results of in silico analysis were validated by examining the combined effects of hesperetin (Hst) and vincristine (VCR) on MCF-7 cells. In general, the results of the in silico analysis revealed that the combination of these two kinds of agents could be useful for treating cancer. However, the PPI analysis revealed that there were a few important proteins that could be targeted for intelligent therapy while giving treatment with these agents. In vitro experiments confirmed the results of the in silico analysis. Also, Hst and VCR had good harmony in modulating the hub genes obtained from the in silico analysis and inducing apoptosis in the MCF-7 cell line.

Indexed as

Anticarcinogenic AgentsNeoplasmsAntineoplastic Combined Chemotherapy ProtocolsApoptosisData MiningVincristineAnticarcinogenic AgentsVincristine

Identifiers

PMID36367850
PMCPMC9651583
OpenAlexW4308914801

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.