Evidence map›Paper›PMID 36366587›Full record

ArticleViruses2022

Novel RNA Viruses Discovered in Weeds in Rice Fields.

Shufen Chao, Haoran Wang, Shu Zhang, Guoqing Chen, Chonghui Mao, Yang Hu, Fengquan Yu, Shuo Wang, Liang Lv, Long Chen and 1 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Shufen ChaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
Haoran WangState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
Shu ZhangInstitute of Plant Protection & Soil fertilizer, Hubei Academy of Agricultural Sciences, Wuhan 430000, China.
Guoqing ChenState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
Chonghui MaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
Yang HuInstitute of Plant Protection, Guizhou Academy of Agricultural Sciences, Guiyang 550000, China.
Fengquan YuInstitute of Plant Protection, Liaoning Academy of Agricultural Sciences, Shenyang 110000, China.
Shuo WangSanya Agricultural Technology Extension and Service Centre, Sanya 572000, China.
Liang LvInstitute of Plant Protection & Soil fertilizer, Hubei Academy of Agricultural Sciences, Wuhan 430000, China.
Long ChenState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
Guozhong FengState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 311400, China.
China National Rice Research Institute · CNChinese Academy of Agricultural Sciences · CNInstitute of Plant Protection · CNGuizhou Institute of Plant Protection · CNHubei Academy of Agricultural Sciences · CNSanya University · CN

Funding

NIEHS NIH HHS 27306C2006
6 · The paper itself

Abstract

Weeds often grow alongside crop plants. In addition to competing with crops for nutrients, water and space, weeds host insect vectors or act as reservoirs for viral diversity. However, little is known about viruses infecting rice weeds. In this work, we used metatranscriptomic deep sequencing to identify RNA viruses from 29 weed samples representing 23 weed species. A total of 224 RNA viruses were identified: 39 newly identified viruses are sufficiently divergent to comprise new families and genera. The newly identified RNA viruses clustered within 18 viral families. Of the identified viruses, 196 are positive-sense single-stranded RNA viruses, 24 are negative-sense single-stranded RNA viruses and 4 are double-stranded RNA viruses. We found that some novel RNA viruses clustered within the families or genera of several plant virus species and have the potential to infect plants. Collectively, these results expand our understanding of viral diversity in rice weeds. Our work will contribute to developing effective strategies with which to manage the spread and epidemiology of plant viruses.

Indexed as

OryzaPlant VirusesRNA VirusesCrops, AgriculturalHumansPlant Weedsmetatranscriptomicsplant virusesRNA virusesviral diversityweed

Identifiers

PMID36366587
PMCPMC9717734
OpenAlexW4308695789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.