Evidence map›Paper›PMID 36361550›Full record

ArticleInternational journal of molecular sciences2022

Expression of DNA Methyltransferase 3B Isoforms Is Associated with DNA Satellite 2 Hypomethylation and Clinical Prognosis in Advanced High-Grade Serous Ovarian Carcinoma.

Victor M Del Castillo Falconi, José Díaz-Chávez, Karla Torres-Arciga, Fernando Luna-Maldonado, Adriana A Gudiño-Gomez, Abraham Pedroza-Torres, Clementina Castro-Hernández, David Cantú de León, Luis A Herrera

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Victor M Del Castillo FalconiInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.
José Díaz-ChávezInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.ORCID 0000-0001-9583-3790
Karla Torres-ArcigaInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.ORCID 0000-0002-4658-5310
Fernando Luna-MaldonadoInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.
Adriana A Gudiño-GomezInstituto Nacional de Medicina Genómica, Periferico Sur 4809, Arenal Tepepan, Tlalpan, Ciudad de México 14610, Mexico.
Abraham Pedroza-TorresCátedras CONACYT-Instituto Nacional de Cancerología, Ciudad de México 14610, Mexico.ORCID 0000-0001-7857-3464
Clementina Castro-HernándezInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.ORCID 0000-0002-5641-3627
David Cantú de LeónInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.
Luis A HerreraInstituto Nacional de Cancerología (INCAN), Unidad de Investigación Biomédica en Cáncer, Instituto de Investigaciones Biomédicas, UNAM, Avenida San Fernando No. 22, Sección XVI Tlalpan, Ciudad de México 14080, Mexico.ORCID 0000-0003-3998-9306
Instituto Nacional de Cancerología · MXNational Institute of Genomic Medicine · MX

Funding

Consejo Nacional de Ciencia y Tecnología 168896Consejo Nacional de Ciencia y Tecnología 261875
6 · The paper itself

Abstract

Alterations in DNA methylation are critical for the carcinogenesis of ovarian tumors, especially ovarian carcinoma (OC). DNMT3B, a de novo DNA methyltransferase (DNMT), encodes for fifteen spliced protein products or isoforms. DNMT3B isoforms lack exons for the catalytic domain, with functional consequences on catalytic activity. Abnormal expression of DNMT3B isoforms is frequently observed in several types of cancer, such as breast, lung, kidney, gastric, liver, skin, leukemia, and sarcoma. However, the expression patterns and consequences of DNMT3B isoforms in OC are unknown. In this study, we analyzed each DNMT and DNMT3B isoforms expression by qPCR in 63 OC samples and their association with disease-free survival (DFS), overall survival (OS), and tumor progression. We included OC patients with the main histological subtypes of EOC and patients in all the disease stages and found that DNMTs were overexpressed in advanced stages (p-value < 0.05) and high-grade OC (p-value < 0.05). Remarkably, we found DNMT3B1 overexpression in advanced stages (p-value = 0.0251) and high-grade serous ovarian carcinoma (HGSOC) (p-value = 0.0313), and DNMT3B3 was overexpressed in advanced stages (p-value = 0.0098) and high-grade (p-value = 0.0004) serous ovarian carcinoma (SOC). Finally, we observed that overexpression of DNMT3B isoforms was associated with poor prognosis in OC and SOC. DNMT3B3 was also associated with FDS (p-value = 0.017) and OS (p-value = 0.038) in SOC patients. In addition, the ovarian carcinoma cell lines OVCAR3 and SKOV3 also overexpress DNMT3B3. Interestingly, exogenous overexpression of DNMT3B3 in OVCAR3 causes demethylation of satellite 2 sequences in the pericentromeric region. In summary, our results suggest that DNMT3B3 expression is altered in OC.

Indexed as

Cystadenocarcinoma, SerousOvarian NeoplasmsApoptosisCarcinoma, Ovarian EpithelialCell Line, TumorDNADNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3BFemaleHumansProtein IsoformsDNADNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BProtein Isoformsbiomarkerscancer epigeneticsDNA methylationDNMT3B isoformshistological gradeovarian cancer

Identifiers

PMID36361550
PMCPMC9654283
OpenAlexW4307270171

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.