Evidence map›Paper›PMID 36360323›Full record

ArticleGenes2022

Implementation of Public Funded Genome Sequencing in Evaluation of Fetal Structural Anomalies.

Po Lam So, Annie Shuk Yi Hui, Teresa Wei Ling Ma, Wendy Shu, Amelia Pui Wah Hui, Choi Wah Kong, Tsz Kin Lo, Amanda Nim Chi Kan, Elaine Yee Ling Kan, Shuk Ching Chong and 5 more

Abstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Po Lam SoDepartment of Obstetrics and Gynecology, Tuen Mun Hospital, Hong Kong SAR, China.
Annie Shuk Yi HuiDepartment of Obstetrics & Gynaecology, Prince of Wales Hospital, Hong Kong SAR, China.ORCID 0000-0001-5042-4731
Teresa Wei Ling MaDepartment of Obstetrics & Gynaecology, Queen Elizabeth Hospital, Hong Kong SAR, China.
Wendy ShuDepartment of Obstetrics & Gynaecology, Pamela Youde Nethersole Eastern Hospital, Hong Kong SAR, China.
Amelia Pui Wah HuiDepartment of Obstetrics & Gynaecology, Queen Mary Hospital, Hong Kong SAR, China.ORCID 0000-0001-7376-7307
Choi Wah KongDepartment of Obstetrics & Gynaecology, United Christian Hospital, Hong Kong SAR, China.
Tsz Kin LoDepartment of Obstetrics & Gynaecology, Princess Margaret Hospital, Hong Kong SAR, China.
Amanda Nim Chi KanDepartment of Pathology, Hong Kong Children's Hospital, Hong Kong SAR, China.
Elaine Yee Ling KanDepartment of Radiology, Hong Kong Children's Hospital, Hong Kong SAR, China.
Shuk Ching ChongDepartment of Paediatrics, Prince of Wales Hospital, Hong Kong SAR, China.ORCID 0000-0002-9675-7424
Brian Hon Yin ChungDepartment of Paediatrics and Adolescent Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.
Ho Ming LukClinical Genetics Service Unit, Hong Kong Children's Hospital, Hong Kong SAR, China.ORCID 0000-0003-4066-4066
Kwong Wai ChoyPrenatal Genetic Diagnosis Centre, Department of Obstetrics & Gynaecology, Chinese University of Hong Kong, Hong Kong SAR, China.ORCID 0000-0002-3616-6200
Anita Sik Yau KanPrenatal Diagnostic Laboratory, Tsan Yuk Hospital, Hong Kong SAR, China.
Wing Cheong LeungDepartment of Obstetrics & Gynaecology, Kwong Wah Hospital, Hong Kong SAR, China.ORCID 0000-0003-1851-2138

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

With the advancements in prenatal diagnostics, genome sequencing is now incorporated into clinical use to maximize the diagnostic yield following uninformative conventional tests (karyotype and chromosomal microarray analysis). Hong Kong started publicly funded prenatal genomic sequencing as a sequential test in the investigation of fetal structural anomalies in April 2021. The objective of the study was to evaluate the clinical performance and usefulness of this new service over one year. We established a web-based multidisciplinary team to facilitate case selection among the expert members. We retrospectively analyzed the fetal phenotypes, test results, turnaround time and clinical impact in the first 15 whole exome sequencing and 14 whole genome sequencing. Overall, the molecular diagnostic rate was 37.9% (11/29). De novo autosomal dominant disorders accounted for 72.7% (8/11), inherited autosomal recessive disorders for 18.2% (2/11), and inherited X-linked disorders for 9.1% (1/11). The median turnaround time for ongoing pregnancy was 19.5 days (range, 13-31 days). Our study showed an overall clinical impact of 55.2% (16/29), which influenced reproductive decision-making in four cases, guided perinatal management in two cases and helped future family planning in ten cases. In conclusion, our findings support the important role of genome sequencing services in the prenatal diagnosis of fetal structural anomalies in a population setting. It is important to adopt a multidisciplinary team approach to support the comprehensive genetic service.

Indexed as

Prenatal DiagnosisUltrasonography, PrenatalExome SequencingFemaleFetusHumansPregnancyRetrospective Studiesclinical impactdiagnostic yieldfetal structural anomaliesgenome sequencing

Identifiers

PMID36360323
PMCPMC9690018

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.