Evidence map›Paper›PMID 36358942›Full record

ArticleBiomolecules2022

Blood Transcript Biomarkers Selected by Machine Learning Algorithm Classify Neurodegenerative Diseases including Alzheimer's Disease.

Carol J Huseby, Elaine Delvaux, Danielle L Brokaw, Paul D Coleman

Abstract read
In one paragraph

Article in Biomolecules, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Carol J HusebyASU-Banner Neurodegenerative Disease Research Center, Arizona State University, Tempe, AZ 85281, USA.
Elaine DelvauxASU-Banner Neurodegenerative Disease Research Center, Arizona State University, Tempe, AZ 85281, USA.
Danielle L BrokawPerelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Paul D ColemanASU-Banner Neurodegenerative Disease Research Center, Arizona State University, Tempe, AZ 85281, USA.

Funding

Postdoctoral Training, Neurobiology of Aging and Alzheimer's DiseaseT32AG044402 · NIA · UNIVERSITY OF ARIZONA · PI CAROL A. BARNES · 2016 to 2026
$1.8M
NIA NIH HHS T32 AG044402
6 · The paper itself

Abstract

The clinical diagnosis of neurodegenerative diseases is notoriously inaccurate and current methods are often expensive, time-consuming, or invasive. Simple inexpensive and noninvasive methods of diagnosis could provide valuable support for clinicians when combined with cognitive assessment scores. Biological processes leading to neuropathology progress silently for years and are reflected in both the central nervous system and vascular peripheral system. A blood-based screen to distinguish and classify neurodegenerative diseases is especially interesting having low cost, minimal invasiveness, and accessibility to almost any world clinic. In this study, we set out to discover a small set of blood transcripts that can be used to distinguish healthy individuals from those with Alzheimer's disease, Parkinson's disease, Huntington's disease, amyotrophic lateral sclerosis, Friedreich's ataxia, or frontotemporal dementia. Using existing public datasets, we developed a machine learning algorithm for application on transcripts present in blood and discovered small sets of transcripts that distinguish a number of neurodegenerative diseases with high sensitivity and specificity. We validated the usefulness of blood RNA transcriptomics for the classification of neurodegenerative diseases. Information about features selected for the classification can direct the development of possible treatment strategies.

Indexed as

Alzheimer DiseaseHuntington DiseaseNeurodegenerative DiseasesBiomarkersHumansMachine LearningBiomarkersAlzheimer’s diseaseamyotrophic lateral sclerosis or Lou Gehrig’s diseaseFriedreich’s ataxiafrontotemporal dementiaHuntington’s diseaselinear discriminant analysismachine learningParkinson’s diseaserandom forest classificationwhole blood RNA

Identifiers

PMID36358942
PMCPMC9687215

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.