Evidence map›Paper›PMID 36357948›Full record

ArticleAntimicrobial resistance and infection control2022

Validating administrative data to identify complex surgical site infections following cardiac implantable electronic device implantation: a comparison of traditional methods and machine learning.

Elissa Rennert-May, Jenine Leal, Matthew K MacDonald, Kristine Cannon, Stephanie Smith, Derek Exner, Oscar E Larios, Kathryn Bush, Derek Chew

Abstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elissa Rennert-MayDepartment of Medicine, University of Calgary, Calgary, AB, Canada. elissa.rennertmay@ucalgary.ca.
Jenine LealDepartment of Community Health Sciences, University of Calgary, Calgary, AB, Canada.
Matthew K MacDonaldLibin Cardiovascular Institute, University of Calgary, Calgary, AB, Canada.
Kristine CannonInfection Prevention and Control, Alberta Health Services, Calgary, AB, Canada.
Stephanie SmithDepartment of Medicine, University of Alberta, Edmonton, AB, Canada.
Derek ExnerLibin Cardiovascular Institute, University of Calgary, Calgary, AB, Canada.
Oscar E LariosDepartment of Medicine, University of Calgary, Calgary, AB, Canada.
Kathryn BushInfection Prevention and Control, Alberta Health Services, Calgary, AB, Canada.
Derek ChewDepartment of Medicine, University of Calgary, Calgary, AB, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCardiac implantable electronic device (CIED) surgical site infections (SSIs) have been outpacing the increases in implantation of these devices. While traditional surveillance of these SSIs by infection prevention and control would likely be the most accurate, this is not practical in many centers where resources are constrained. Therefore, we explored the validity of administrative data at identifying these SSIs.

methodsWe used a cohort of all patients with CIED implantation in Calgary, Alberta where traditional surveillance was done for infections from Jan 1, 2013 to December 31, 2019. We used this infection subgroup as our "gold standard" and then utilized various combinations of administrative data to determine which best optimized the sensitivity and specificity at identifying infection. We evaluated six approaches to identifying CIED infection using administrative data, which included four algorithms using International Classification of Diseases codes and/or Canadian Classification of Health Intervention codes, and two machine learning models. A secondary objective of our study was to assess if machine learning techniques with training of logistic regression models would outperform our pre-selected codes.

resultsWe determined that all of the pre-selected algorithms performed well at identifying CIED infections but the machine learning model was able to produce the optimal method of identification with an area under the receiver operating characteristic curve (AUC) of 96.8%. The best performing pre-selected algorithm yielded an AUC of 94.6%.

conclusionsOur findings suggest that administrative data can be used to effectively identify CIED infections. While machine learning performed the most optimally, in centers with limited analytic capabilities a simpler algorithm of pre-selected codes also has excellent yield. This can be valuable for centers without traditional surveillance to follow trends in SSIs over time and identify when rates of infection are increasing. This can lead to enhanced interventions for prevention of SSIs.

Indexed as

Machine LearningSurgical Wound InfectionAlbertaCohort StudiesElectronicsHumansAdministrative dataSurgical site infectionsSurveillance

Identifiers

PMID36357948
PMCPMC9650806

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.