Evidence map›Paper›PMID 36357913›Full record

ArticleBMC neuroscience2022

Mechanism of LSD1 in oxygen-glucose deprivation/reoxygenation-induced pyroptosis of retinal ganglion cells via the miR-21-5p/NLRP12 axis.

Xiuling Yu, Tongtong Niu, Chi Liu

Open access · goldAbstract read
In one paragraph

Article in BMC neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Deletion of histone demethylaseFrontiers in cellular neuroscience · 2023
    Article
  4. Posttranslational modifications of proteins in diseased retina.Frontiers in cellular neuroscience · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Xiuling YuDepartment of Ophthalmology, China Medical University the Fourth People's Hospital of Shenyang, No.20 Huang He Street, Huang Gu District, Shenyang City, 110031, Liaoning Province, China. syyuxiuling@163.com.
Tongtong NiuDepartment of Ophthalmology, China Medical University the Fourth People's Hospital of Shenyang, No.20 Huang He Street, Huang Gu District, Shenyang City, 110031, Liaoning Province, China.
Chi LiuDepartment of Ophthalmology, China Medical University the Fourth People's Hospital of Shenyang, No.20 Huang He Street, Huang Gu District, Shenyang City, 110031, Liaoning Province, China.
China Medical University · CNFourth Affiliated Hospital of China Medical University · CNShenyang The Fourth Hospital of People · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRetinal ganglion cells (RGCs) are important retinal neurons that connect visual receptors to the brain, and lysine-specific demethylase 1 (LSD1) is implicated in the development of RGCs. This study expounded the mechanism of LSD1 in oxygen-glucose deprivation/reoxygenation (OGD/R)-induced pyroptosis of RGCs.

methodsMouse RGCs underwent OGD/R exposure, and then RGC viability was examined using the cell counting kit-8 method. The mRNA levels of Caspase 1, the protein levels of NOD-like receptor family pyrin domain-containing 3 (NLRP3), N-terminal fragment of gasdermin D (GSDMD-N), and cleaved-Caspase1, and the concentrations of interleukin (IL)-1β and IL-18 were respectively examined. Subsequently, LSD1 expression was intervened to explore the underlying effect of LSD1 on OGD/R-induced pyroptosis of RGCs. Afterwards, the enrichments of LSD1 and histone H3 lysine 4 methylation (H3K4me) 1/2 on the microRNA (miR)-21-5p promoter were determined using chromatin-immunoprecipitation assay. And the binding interaction between miR-21-5p and NLRP12 was detected using dual-luciferase and RNA pull-down assays. Finally, the effects of miR-21-5p/NLRP12 on LSD1-mediated pyroptosis of RGCs were verified through functional rescue experiments.

resultsOGD/R treatment increased pyroptosis of RGCs and LSD1 expression. Silencing LSD1 declined levels of Caspase 1 mRNA, NLRP3, GSDMD-N, cleaved-Caspase1, IL-1β, and IL-18 and limited pyroptosis of OGD/R-treated RGCs. Mechanically, LSD1 suppressed miR-21-5p expression via demethylation of H3K4me2 on the miR-21-5p promoter to hamper the binding of miR-21-5p to NLRP12, and thereby increased NLRP12 expression. Silencing miR-21-5p or overexpressing NLRP12 facilitated OGD/R-induced pyroptosis of RGCs.

conclusionLSD1-mediated demethylation of H3K4me2 decreased miR-21-5p expression to increase NLRP12 expression, promoting pyroptosis of OGD/R-treated RGCs.

Indexed as

MicroRNAsPyroptosisAnimalsCaspase 1Cell LineGlucoseHistone DemethylasesInterleukin-18Intracellular Signaling Peptides and ProteinsLysineMiceNLR Family, Pyrin Domain-Containing 3 ProteinOxygenRetinal Ganglion CellsRNA, MessengerCaspase 1GlucoseHistone DemethylasesInterleukin-18Intracellular Signaling Peptides and ProteinsLysineMicroRNAsNLR Family, Pyrin Domain-Containing 3 ProteinNLRP12 protein, mouseOxygenRNA, MessengerEpigenetic modificationHistone H3LSD1miR-21-5pNLRP12Oxygen-glucose deprivation/reoxygenationPyroptosisRetinal ganglion cells

Identifiers

PMID36357913
PMCPMC9650888
OpenAlexW4308883208

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.