Evidence map›Paper›PMID 36357398›Full record

ArticleNature communications2022

Human infection with a reassortment avian influenza A H3N8 virus: an epidemiological investigation study.

Pengtao Bao, Yang Liu, Xiaoai Zhang, Hang Fan, Jie Zhao, Mi Mu, Haiyang Li, Yanhe Wang, Honghan Ge, Shuang Li and 12 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 74 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 3 countries.

Pengtao Bao *The Eighth Medical Center of Chinese PLA General Hospital, Beijing, 100091, China.
Yang Liu *Zhumadian Central Hospital, Zhumadian, 463000, China.
Xiaoai Zhang *State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Hang Fan *State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Jie ZhaoZhumadian Second People's Hospital, Zhumadian, 463000, China.
Mi MuThe Eighth Medical Center of Chinese PLA General Hospital, Beijing, 100091, China.
Haiyang LiShangcai Caizhou Hospital, Shangcai County, Zhumadian, 463800, China.
Yanhe WangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Honghan GeState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Shuang LiState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Xin YangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
Qianqian CuiDivision of HIV/AIDS and Sex-transmitted Virus Vaccines, Institute for Biological Product Control, National Institutes for Food and Drug Control (NIFDC), Beijing, China.
Rui ChenZhumadian Central Hospital, Zhumadian, 463000, China.
Liang GaoZhumadian Central Hospital, Zhumadian, 463000, China.
Zhihua SunZhumadian Central Hospital, Zhumadian, 463000, China.
Lizhen GaoZhumadian Central Hospital, Zhumadian, 463000, China.
Shuang QiuZhumadian Central Hospital, Zhumadian, 463000, China.
Xuchun LiuZhumadian Central Hospital, Zhumadian, 463000, China.
Peter W HorbyPandemic Sciences Institute, University of Oxford, Oxford, UK. peter.horby@ndm.ox.ac.uk.ORCID 0000-0002-9822-1586
Xiubin LiThe Eighth Medical Center of Chinese PLA General Hospital, Beijing, 100091, China. klootair@163.com.ORCID 0000-0002-6835-6340
Liqun FangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China. fang_lq@163.com.ORCID 0000-0002-4981-1483
Wei LiuState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China. lwbime@163.com.
Zhumadian Central Hospital · CNInstitute of Microbiology · CNChinese PLA General Hospital · CNAnhui Medical University · CNInstitute of Microbiology · BYNational Institutes for Food and Drug Control · CNUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A four-year-old boy developed recurrent fever and severe pneumonia in April, 2022. High-throughput sequencing revealed a reassortant avian influenza A-H3N8 virus (A/Henan/ZMD-22-2/2022(H3N8) with avian-origin HA and NA genes. The six internal genes were acquired from Eurasian lineage H9N2 viruses. Molecular substitutions analysis revealed the haemagglutin retained avian-like receptor binding specificity but that PB2 genes possessed sequence changes (E627K) associated with increased virulence and transmissibility in mammalian animal models. The patient developed respiratory failure, liver, renal, coagulation dysfunction and sepsis. Endotracheal intubation and extracorporeal membrane oxygenation were administered. H3N8 RNA was detected from nasopharyngeal swab of a dog, anal swab of a cat, and environmental samples collected in the patient's house. The full-length HA sequences from the dog and cat were identical to the sequence from the patient. No influenza-like illness was developed and no H3N8 RNA was identified in family members. Serological testing revealed neutralizing antibody response against ZMD-22-2 virus in the patient and three family members. Our results suggest that a triple reassortant H3N8 caused severe human disease. There is some evidence of mammalian adaptation, possible via an intermediary mammalian species, but no evidence of person-to-person transmission. The potential threat from avian influenza viruses warrants continuous evaluation and mitigation.

Indexed as

Cat DiseasesDog DiseasesInfluenza A Virus, H3N8 SubtypeInfluenza A Virus, H9N2 SubtypeInfluenza, HumanInfluenza in BirdsOrthomyxoviridae InfectionsAnimalsBirdsCatsChild, PreschoolDogsHumansMaleMammalsPhylogenyRNA

Identifiers

PMID36357398
PMCPMC9649012
OpenAlexW4308888357

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.