Evidence map›Paper›PMID 36356080›Full record

ArticleVeterinary sciences2022

The Genomic and Genetic Evolution Analysis of Rabbit Astrovirus.

Qiaoya Zhao, Ye Tian, Liping Liu, Yifei Jiang, Haitao Sun, Shanjie Tan, Bing Huang

Open access · goldAbstract read
In one paragraph

Article in Veterinary sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Qiaoya ZhaoInstitute of Poultry Sciences, Shandong Academy of Agricultural Sciences, Jinan 250100, China.ORCID 0000-0003-0478-1986
Ye TianInstitute of Poultry Sciences, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Liping LiuInstitute of Poultry Sciences, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yifei JiangInstitute of Poultry Sciences, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Haitao SunInstitute of Animal Husbandry and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Shanjie TanLinyi Animal Husbandry Development Promotion Center, Linyi 276600, China.
Bing HuangInstitute of Poultry Sciences, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Shandong Academy of Agricultural Sciences · CNAnimal Science Research Institute · CN

Funding

Agricultural scientific and technological innovation project of Shandong Academy of Agricultural Sciences CXGC2022A25Key Research and Development Program of Shandong Province 2022CXGC010606Modern Agro-industry Technology Research System CARS-43-G-7Shandong Modern Agricultural Technology & Industry System SDAIT-21-06
6 · The paper itself

Abstract

Rabbit astrovirus (RAstV) is a pathogen that causes diarrhea in rabbits, with high infection rate at various stages, which can often cause secondary or mixed infections with other pathogens, bringing great economic losses to the rabbit industry. In this study, 10 samples were collected from cases of rabbits with diarrhea on a rabbit meat farm in the Shandong area of China. The positive sample for astrovirus detected by RT-PCR was inoculated into an RK 13 cell line. A rabbit astrovirus strain named Z317 was successfully isolated, which produced an obvious cytopathic effect 48 h post-inoculation in the RK 13 cell line. The genome structure of this isolate was studied by high-throughput sequencing, showing that the Z317 strain had the highest similarity with the American strain TN/2208/2010, with 92.43% nucleotide homology, belonging to group MRAstV-23. The basic properties of the Z317 capsid (Cap) protein were analyzed, and 10 liner B cell epitopes were screened with the online biosoft Bepipred 2.0 and SVMTriP, including 445-464, 186-205, 655-674, 88-107, 792-811, 45-64, and 257-276 amino acids. This is the first contribution concerning RAstV genomes in China; more studies are needed to understand the diversity and impact of RAstV on rabbit health.

Indexed as

astrovirusgene evolutiongene structurevirus isolation

Identifiers

PMID36356080
PMCPMC9697364
OpenAlexW4307923255

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.