Evidence map›Paper›PMID 36355418›Full record

ArticleMicrobial genomics2022

Evaluation of tangential flow filtration coupled to long-read sequencing for ostreid herpesvirus type 1 genome assembly.

Aurélie Dotto-Maurel, Camille Pelletier, Benjamin Morga, Maude Jacquot, Nicole Faury, Lionel Dégremont, Maëlis Bereszczynki, Jean Delmotte, Jean-Michel Escoubas, Germain Chevignon

Abstract read
In one paragraph

Article in Microbial genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Aurélie Dotto-MaurelIfremer, ASIM, F-17390 La Tremblade, France.
Camille PelletierIfremer, ASIM, F-17390 La Tremblade, France.
Benjamin MorgaIfremer, ASIM, F-17390 La Tremblade, France.
Maude JacquotIfremer, ASIM, F-17390 La Tremblade, France.
Nicole FauryIfremer, ASIM, F-17390 La Tremblade, France.
Lionel DégremontIfremer, ASIM, F-17390 La Tremblade, France.
Maëlis BereszczynkiIHPE, Univ. Montpellier, CNRS, Ifremer, UPVD, F-34095 Montpellier, France.
Jean DelmotteIHPE, Univ. Montpellier, CNRS, Ifremer, UPVD, F-34095 Montpellier, France.
Jean-Michel EscoubasIHPE, Univ. Montpellier, CNRS, Ifremer, UPVD, F-34095 Montpellier, France.
Germain ChevignonIfremer, ASIM, F-17390 La Tremblade, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole-genome sequencing is widely used to better understand the transmission dynamics, the evolution and the emergence of new variants of viral pathogens. This can bring crucial information to stakeholders for disease management. Unfortunately, aquatic virus genomes are usually difficult to characterize because most of these viruses cannot be easily propagated

Indexed as

CrassostreaDNA VirusesHerpesviridaeAnimalsDNA, ViralDNA, ViralCrassostrea gigasIlluminaostreid herpesvirus type 1oxford nanopore technologiestangential flow filtrationvirus

Identifiers

PMID36355418
PMCPMC9836095

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.