Evidence map›Paper›PMID 36354667›Full record

ArticleCurrent issues in molecular biology2022

SOD2 Gene Variants (rs4880 and rs5746136) and Their Association with Breast Cancer Risk.

Martha P Gallegos-Arreola, Ramiro Ramírez-Patiño, Josefina Y Sánchez-López, Guillermo M Zúñiga-González, Luis E Figuera, Jorge I Delgado-Saucedo, Belinda C Gómez-Meda, Mónica A Rosales-Reynoso, Ana M Puebla-Pérez, María L Lemus-Varela and 4 more

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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    Review
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  9. Journal of breast cancer · 2023
    Article
  10. Article
  11. Analytical Validation ofMethods and protocols · 2022
    Article
  12. Association ofPharmacogenomics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Martha P Gallegos-ArreolaDivisión de Genética, Centro de Investigación Biomédica de Occidente (CIBO), Instituto Mexicano del Seguro Social (IMSS), 44340 Guadalajara, Mexico.ORCID 0000-0003-4539-1693
Ramiro Ramírez-PatiñoDepartamento de Medicina y Ciencias de la Vida, Centro Universitario la Ciénega, Universidad de Guadalajara, 47810 Ocotlán, Mexico.
Josefina Y Sánchez-LópezDivisión de Genética, Centro de Investigación Biomédica de Occidente (CIBO), Instituto Mexicano del Seguro Social (IMSS), 44340 Guadalajara, Mexico.
Guillermo M Zúñiga-GonzálezDivisión de Medicina Molecular, CIBO, IMSS, 44340 Guadalajara, Mexico.ORCID 0000-0003-1257-4637
Luis E FigueraDivisión de Genética, Centro de Investigación Biomédica de Occidente (CIBO), Instituto Mexicano del Seguro Social (IMSS), 44340 Guadalajara, Mexico.
Jorge I Delgado-SaucedoLaboratorio de Inmunofarmacología, Departamento de Farmacología, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, 44100 Guadalajara, Mexico.
Belinda C Gómez-MedaDepartamento de Biología Molecular y Genómica, Instituto de Genética Humana "Dr. Enrique Corona Rivera", Centro Universitario de Ciencias de la Salud, Universidad de Guadalajara, 44100 Guadalajara, Mexico.ORCID 0000-0003-2774-6390
Mónica A Rosales-ReynosoDivisión de Medicina Molecular, CIBO, IMSS, 44340 Guadalajara, Mexico.
Ana M Puebla-PérezLaboratorio de Inmunofarmacología, Departamento de Farmacología, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, 44100 Guadalajara, Mexico.
María L Lemus-VarelaDepartamento de Neonatología, Hospital de Pediatría, UMAE, CMNO, IMSS, 44340 Guadalajara, Mexico.
Asbiel F Garibaldi-RíosDoctorado en Genética Humana, IGH, CUCS, Universidad de Guadalajara, 44100 Guadalajara, Mexico.
Nayely A Marín-DomínguezDivisión de Genética, Centro de Investigación Biomédica de Occidente (CIBO), Instituto Mexicano del Seguro Social (IMSS), 44340 Guadalajara, Mexico.
Diana P Pacheco-VerduzcoDivisión de Genética, Centro de Investigación Biomédica de Occidente (CIBO), Instituto Mexicano del Seguro Social (IMSS), 44340 Guadalajara, Mexico.
Emaan A Mohamed-FloresHospital de Gineco-Obstetricia, UMAE, CMNO, IMSS, 44340 Guadalajara, Mexico.
Mexican Social Security Institute · MXUniversidad de Guadalajara · MX

Funding

Ciencia Básica y/o Frontera, Modalidad: Paradigmas y Controversias de la Ciencia 2022, CONACYT, 320484
6 · The paper itself

Abstract

The superoxide dismutase (SOD) is the principal antioxidant defense system in the body that is activated by a reactive oxygen species. Some variants of the SOD2 gene have been associated with cancer. The rs4880 variant was determined by PCR real-time and the rs5746136 variant by PCR-RFLP in healthy subjects and in breast cancer (BC) patients. The rs4880 and rs5746136 variants were associated with BC susceptibility when BC patients and the control group were compared for the CT, TT, CTCC, and the T alleles (p < 0.05). The CT genotype of the rs4880 variant showed significant statistical differences in patients and controls aged ≤ 45 years old, and with hormonal consumption (p < 0.05). The rs4880 variant was associated with BC patients with CTTT genotype and obesity, the presence of DM2-SAH, and a non-chemotherapy response (p < 0.05). Additionally, the rs5746136 variant was associated with susceptibility to BC with Ki-67 (≥20%), luminal A type BC, and a chemotherapy partial response (p < 0.05) in BC patients who carry TT, TC, and CTTT genotypes, respectively. The haplotype T/T (OR 1.98; 95% CI 1.20−3.26, p = 0.005) was observed to be a risk factor for BC. The rs4880 and rs5746136 variants in the SOD2 gene were associated with BC susceptibility.

Indexed as

breast cancerROSrs4880rs5746136SOD2variant

Identifiers

PMID36354667
PMCPMC9688594
OpenAlexW4307551228

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.