Evidence map›Paper›PMID 36354662›Full record

ArticleCurrent issues in molecular biology2022

Immune Pathway and Gene Database (IMPAGT) Revealed the Immune Dysregulation Dynamics and Overactivation of the PI3K/Akt Pathway in Tumor Buddings of Cervical Cancer.

Yeseul Choi, Nora Jee-Young Park, Tan Minh Le, Eunmi Lee, Donghyeon Lee, Hong Duc Thi Nguyen, Junghwan Cho, Ji-Young Park, Hyung Soo Han, Gun Oh Chong

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yeseul ChoiDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.
Nora Jee-Young ParkDepartment of Pathology, School of Medicine, Kyungpook National University, Daegu 41944, Korea.
Tan Minh LeDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.ORCID 0000-0002-9621-8877
Eunmi LeeDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.ORCID 0000-0002-4150-2491
Donghyeon LeeDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.
Hong Duc Thi NguyenDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.ORCID 0000-0003-0649-9175
Junghwan ChoClinical Omics Institute, Kyungpook National University, Daegu 41405, Korea.
Ji-Young ParkDepartment of Pathology, School of Medicine, Kyungpook National University, Daegu 41944, Korea.ORCID 0000-0002-7571-1064
Hyung Soo HanDepartment of Biomedical Science, Graduate School, Kyungpook National University, Daegu 41944, Korea.ORCID 0000-0001-7200-0921
Gun Oh ChongClinical Omics Institute, Kyungpook National University, Daegu 41405, Korea.ORCID 0000-0003-4887-4017
Kyungpook National University · KRKyungpook National University Hospital · KR

Funding

Brain Pool Program through the NRF funded by Ministry of Science and ICT NRF-2020H1D3A2A02102040National Research Foundation of Korea NRF-2020R1F1A1076816National Research Foundation of Korea NRF-2022R1F1A1061498
6 · The paper itself

Abstract

Tumor budding (TB) is a small cluster of malignant cells at the invasive front of a tumor. Despite being an adverse prognosis marker, little research has been conducted on the tumor immune microenvironment of tumor buddings, especially in cervical cancer. Therefore, RNA sequencing was performed using 21 formalin-fixed, paraffin-embedded slides of cervical tissues, and differentially expressed genes (DEGs) were analyzed. Immune Pathway and Gene Database (IMPAGT) was generated for immune profiling. "Pathway in Cancer" was identified as the most enriched pathway for both up- and downregulated DEGs. Kyoto Encyclopedia of Genes and Genomes Mapper and Gene Ontology further revealed the activation of the PI3K/Akt signaling pathway. An IMPAGT analysis revealed immune dysregulation even at the tumor budding stage, especially in the PI3K/Akt/mTOR axis, with a high efficiency and integrity. These findings emphasized the clinical significance of tumor buddings and the necessity of blocking the overactivation of the PI3K/Akt/mTOR pathway to improve targeted therapy in cervical cancer.

Indexed as

cervical cancerdifferentially expressed genesGene Ontologyimmune databaseimmune profilingPI3K/Akt signaling pathwayRNA sequencingtumor buddingtumor immune microenvironment

Identifiers

PMID36354662
PMCPMC9688570
OpenAlexW4307273505

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.