Evidence map›Paper›PMID 36354106›Full record

ArticleThe EMBO journal2022

Biochemically validated structural model of the 15-subunit intraflagellar transport complex IFT-B.

Narcis A Petriman, Marta Loureiro-López, Michael Taschner, Nevin K Zacharia, Magdalena M Georgieva, Niels Boegholm, Jiaolong Wang, André Mourão, Robert B Russell, Jens S Andersen and 1 more

Abstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Reconstituting the Motility of Intraflagellar Transport Trains Ex Vivo.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Molecular basis for the activation of outer dynein arms in cilia.Nature structural & molecular biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. The intraflagellar transport cycle.Nature reviews. Molecular cell biology · 2025
    Review
  9. Ciliary and Non-Ciliary Roles of IFT88 in Development and Diseases.International journal of molecular sciences · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Architecture of intraflagellar transport complexes.Nature structural & molecular biology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Narcis A PetrimanDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.ORCID 0000-0002-3189-7530
Marta Loureiro-LópezDepartment for Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.
Michael TaschnerDepartment of Fundamental Microbiology, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-8881-3705
Nevin K ZachariaDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.ORCID 0000-0003-2613-2610
Magdalena M GeorgievaBioQuant, Heidelberg University, Heidelberg, Germany.
Niels BoegholmDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.ORCID 0000-0003-4831-6365
Jiaolong WangDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.
André MourãoInstitute of Structural Biology, Helmholtz Zentrum München, Neuherberg, Germany.
Robert B RussellBioQuant, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-7213-1398
Jens S AndersenDepartment for Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.ORCID 0000-0002-6091-140X
Esben LorentzenDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.ORCID 0000-0001-6493-7220

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cilia are ubiquitous eukaryotic organelles impotant for cellular motility, signaling, and sensory reception. Cilium formation requires intraflagellar transport of structural and signaling components and involves 22 different proteins organized into intraflagellar transport (IFT) complexes IFT-A and IFT-B that are transported by molecular motors. The IFT-B complex constitutes the backbone of polymeric IFT trains carrying cargo between the cilium and the cell body. Currently, high-resolution structures are only available for smaller IFT-B subcomplexes leaving > 50% structurally uncharacterized. Here, we used Alphafold to structurally model the 15-subunit IFT-B complex. The model was validated using cross-linking/mass-spectrometry data on reconstituted IFT-B complexes, X-ray scattering in solution, diffraction from crystals as well as site-directed mutagenesis and protein-binding assays. The IFT-B structure reveals an elongated and highly flexible complex consistent with cryo-electron tomographic reconstructions of IFT trains. The IFT-B complex organizes into IFT-B1 and IFT-B2 parts with binding sites for ciliary cargo and the inactive IFT dynein motor, respectively. Interestingly, our results are consistent with two different binding sites for IFT81/74 on IFT88/70/52/46 suggesting the possibility of different structural architectures for the IFT-B1 complex. Our data present a structural framework to understand IFT-B complex assembly, function, and ciliopathy variants.

Indexed as

CiliaDyneinsBinding SitesBiological TransportFlagellaModels, StructuralDyneinsAlphaFoldCiliumIFT-B structureIntraflagellar transportStructural modeling

Identifiers

PMID36354106
PMCPMC9753473

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.