Evidence map›Paper›PMID 36354005›Full record

ArticleNucleic acids research2022

The stationary phase-specific sRNA FimR2 is a multifunctional regulator of bacterial motility, biofilm formation and virulence.

Nicole Raad, Disha Tandon, Siegfried Hapfelmeier, Norbert Polacek

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. sRNA113 regulatesZoological research · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Antimicrobial resistance and mechanisms of epigenetic regulation.Frontiers in cellular and infection microbiology · 2023
    Review
  13. Review
  14. Prokaryotic ncRNAs: Master regulators of gene expression.Current research in pharmacology and drug discovery · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nicole RaadDepartment of Chemistry, Biochemistry, and Pharmaceutical Sciences, University of Bern, Bern, Switzerland.
Disha TandonGraduate School for Cellular and Biomedical Sciences, Bern, Switzerland.
Siegfried HapfelmeierInstitute for Infectious Diseases, University of Bern, Bern, Switzerland.
Norbert PolacekDepartment of Chemistry, Biochemistry, and Pharmaceutical Sciences, University of Bern, Bern, Switzerland.ORCID 0000-0001-5317-3990
University of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial pathogens employ a plethora of virulence factors for host invasion, and their use is tightly regulated to maximize infection efficiency and manage resources in a nutrient-limited environment. Here we show that during Escherichia coli stationary phase the 3' UTR-derived small non-coding RNA FimR2 regulates fimbrial and flagellar biosynthesis at the post-transcriptional level, leading to biofilm formation as the dominant mode of survival under conditions of nutrient depletion. FimR2 interacts with the translational regulator CsrA, antagonizing its functions and firmly tightening control over motility and biofilm formation. Generated through RNase E cleavage, FimR2 regulates stationary phase biology by fine-tuning target mRNA levels independently of the chaperones Hfq and ProQ. The Salmonella enterica orthologue of FimR2 induces effector protein secretion by the type III secretion system and stimulates infection, thus linking the sRNA to virulence. This work reveals the importance of bacterial sRNAs in modulating various aspects of bacterial physiology including stationary phase and virulence.

Indexed as

Escherichia coliEscherichia coli ProteinsRNA, BacterialBacterial ProteinsBiofilmsGene Expression Regulation, BacterialRepressor ProteinsRNA-Binding ProteinsRNA, Small UntranslatedVirulenceVirulence FactorsBacterial ProteinsCsrA protein, E coliEscherichia coli ProteinsProQ protein, E coliRepressor ProteinsRNA, BacterialRNA-Binding ProteinsRNA, Small UntranslatedVirulence Factors

Identifiers

PMID36354005
PMCPMC9723502
OpenAlexW4308684119

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.