Evidence map›Paper›PMID 36353194›Full record

ArticleAfrican journal of laboratory medicine2022

Agreement between Xpert and AmpFire tests for high-risk human papillomavirus among HIV-positive women in Rwanda.

Anthere Murangwa, Kanan T Desai, Julia C Gage, Gad Murenzi, Patrick Tuyisenge, Faustin Kanyabwisha, Aimable Musafili, Gallican Kubwimana, Leon Mutesa, Kathryn Anastos and 2 more

Registry-linked trialOpen access · diamondAbstract read
In one paragraph

Article in African journal of laboratory medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05247853 (Long-Term Human Papillomavirus Vaccination Effectiveness and Immunity in Rwandan Women Living With and Without Human Immunodeficiency Virus), which is not on this map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05247853 completednot on this map

Long-Term Human Papillomavirus Vaccination Effectiveness and Immunity in Rwandan Women Living With and Without Human Immunodeficiency Virus

TypeobservationalSponsorMontefiore Medical CenterRan2021 to 2024Enrolled3,127ConditionsCervical Cancer, Human Papilloma Virus, Human Immunodeficiency Virus, HPV-Related CarcinomaArmsBlood collection, Oral, cervicovaginal and anal specimen collection, Anoscopy & Biopsy of Acetowhite Lesions, Colposcopy & Biopsy of Acetowhite Lesions, Ablative Treatment
3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Anthere MurangwaRwanda Military Hospital, Kigali, Rwanda.ORCID https://orcid.org/0000-0003-0310-1408
Kanan T DesaiDivision of Cancer Epidemiology & Genetics, National Cancer Institute, National Institutes of Health, Rockville, Maryland, United States.ORCID https://orcid.org/0000-0002-8992-5944
Julia C GageDivision of Cancer Epidemiology & Genetics, National Cancer Institute, National Institutes of Health, Rockville, Maryland, United States.ORCID https://orcid.org/0000-0001-5259-6385
Gad MurenziRwanda Military Hospital, Kigali, Rwanda.ORCID https://orcid.org/0000-0002-5513-5522
Patrick TuyisengeRwanda Military Hospital, Kigali, Rwanda.ORCID https://orcid.org/0000-0003-2609-3797
Faustin KanyabwishaRwanda Military Hospital, Kigali, Rwanda.ORCID https://orcid.org/0000-0002-1774-7739
Aimable MusafiliDepartment of Paediatrics and Child Health, School of Medicine and Pharmacy, College of Medicine and Health Sciences, University of Rwanda, Kigali, Rwanda.ORCID https://orcid.org/0000-0002-1118-5851
Gallican KubwimanaRwanda Military Hospital, Kigali, Rwanda.ORCID https://orcid.org/0000-0002-9894-7416
Leon MutesaResearch for Development (RD Rwanda), Kigali, Rwanda.ORCID https://orcid.org/0000-0002-5308-3706
Kathryn AnastosDepartments of Medicine and Epidemiology & Population Health, Albert Einstein College of Medicine and Montefiore Health Systems, Bronx, New York, United States.ORCID https://orcid.org/0000-0002-0769-6405
Hae-Young KimDepartment of Public Health, New York Medical College, Valhalla, New York, United States.ORCID https://orcid.org/0000-0001-7916-6625
Philip E CastleDivision of Cancer Epidemiology & Genetics, National Cancer Institute, National Institutes of Health, Rockville, Maryland, United States.ORCID https://orcid.org/0000-0002-6408-5985
Rwanda Military Hospital · RWNational Cancer Institute · USMontefiore Health System · USNational Institutes of Health · USNew York Medical College · USRwanda Development Board · RWUniversity of Rwanda · RW

Funding

Einstein/Rwanda/DRC Consortium for Research in HIV/HPV/MalignanciesU54CA254568 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI YOTEBIENG, MARCEL · 2020 to 2024
$5.1M
NCI NIH HHS U54 CA254568
6 · The paper itself

Abstract

Background: High-risk human papillomavirus (hrHPV) may cause more than 99% of cervical cancers worldwide. Little is known about performance differences in tests for hrHPV. Objective: This study analysed agreement for detection of hrHPV between the established, clinically validated Xpert HPV assay and the novel isothermal amplification-based AmpFire HPV genotyping assay. Methods: This study was nested in a larger project on cervical cancer screening among approximately 5000 women living with HIV in Kigali, Rwanda. This sub-study included 298 participants who underwent initial screening for cervical cancer using the Xpert HPV assay and visual inspection with acetic acid in 2017 and tested positive by either or both. Participants were rescreened using colposcopy, and cervical samples were collected between June 2018 and June 2019. Samples were then tested for HPV using the Xpert HPV assay and AmpFire HPV genotyping assay. Agreement between results from both tests was analysed using an exact version of McNemar test and chi-square test. Results: Overall agreement and kappa value for detection of hrHPV by Xpert and AmpFire were 89% and 0.77 (95% confidence interval: 0.70-0.85). AmpFire was marginally more likely to diagnose hrHPV-positive than Xpert ( Conclusion: Overall, there was good to excellent agreement between the Xpert and AmpFire when testing hrHPV types among women living with HIV. AmpFire was more likely to test extra cases of HPV16, the most carcinogenic HPV type, but the clinical meaning of detecting additional HPV16 infections remains unknown.

Indexed as

AmpFire HPV genotyping assaycervical cancer screeninghigh-risk human papillomavirus typeswomen living with HIVXpert HPV assay

Identifiers

PMID36353194
PMCPMC9639372
OpenAlexW4306924585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.