Evidence map›Paper›PMID 36352139›Full record

ArticleNature structural & molecular biology2022

Anionic lipids unlock the gates of select ion channels in the pacemaker family.

Philipp A M Schmidpeter, Di Wu, Jan Rheinberger, Paul M Riegelhaupt, Haiping Tang, Carol V Robinson, Crina M Nimigean

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  6. Unveiling Specificity, Redundancy, and Promiscuity of FiveInternational journal of molecular sciences · 2026
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  18. Constitutive activation mechanism of a class C GPCR.Nature structural & molecular biology · 2024
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Philipp A M SchmidpeterDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0003-2871-9706
Di WuDepartment of Chemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-9748-4408
Jan RheinbergerDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-9901-2065
Paul M RiegelhauptDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0001-8593-2605
Haiping TangDepartment of Chemistry, University of Oxford, Oxford, UK.
Carol V RobinsonDepartment of Chemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-7829-5505
Crina M NimigeanDepartment of Anesthesiology, Weill Cornell Medicine, New York, NY, USA. crn2002@med.cornell.edu.ORCID http://orcid.org/0000-0002-6254-4447
Cornell University · USUniversity of Oxford · GBUniversity of Groningen · NL

Funding

TRD #3: An automated and streamlined pipeline for in-situ molecular microscopyP41GM103310 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI KIEFT, JEFFREY S · 2012 to 2021
$14.7M
Structural dynamics in cyclic nucleotide-modulated channelsR01GM124451 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI NIMIGEAN, CRINA M · 2017 to 2024
$3.2M
Mechanisms of Volatile Anesthetic Modulation of Tandem Pore Potassium ChannelsK08GM132781 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI RIEGELHAUPT, PAUL MICHAEL · 2019 to 2023
$874k
Acquisition of Detector for JEOL 3200 FSC Electron MicroscopeS10OD019994 · OD · NEW YORK STRUCTURAL BIOLOGY CENTER · PI CARRAGHER, BRIDGET OLIVIA · 2015 to 2015
$600k
American Heart Association-American Stroke Association 18POST33960309NIGMS NIH HHS K08 GM132781NIGMS NIH HHS P41 GM103310NIGMS NIH HHS R01 GM124451NIH HHS S10 OD019994
6 · The paper itself

Abstract

Lipids play important roles in regulating membrane protein function, but the molecular mechanisms used are elusive. Here we investigated how anionic lipids modulate SthK, a bacterial pacemaker channel homolog, and HCN2, whose activity contributes to pacemaking in the heart and brain. Using SthK allowed the reconstitution of purified channels in controlled lipid compositions for functional and structural assays that are not available for the eukaryotic channels. We identified anionic lipids bound tightly to SthK and their exact binding locations and determined that they potentiate channel activity. Cryo-EM structures in the most potentiating lipids revealed an open state and identified a nonannular lipid bound with its headgroup near an intersubunit salt bridge that clamps the intracellular channel gate shut. Breaking this conserved salt bridge abolished lipid modulation in SthK and eukaryotic HCN2 channels, indicating that anionic membrane lipids facilitate channel opening by destabilizing these interactions. Our findings underline the importance of state-dependent protein-lipid interactions.

Indexed as

Hyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsMembrane LipidsAnionsAnionsHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsMembrane Lipids

Identifiers

PMID36352139
PMCPMC10022520
OpenAlexW4308649385

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.