Evidence map›Paper›PMID 36351399›Full record

ArticleCell reports2022

Loss of neuronal Tet2 enhances hippocampal-dependent cognitive function.

Karishma J B Pratt, Jeremy M Shea, Laura Remesal-Gomez, Gregor Bieri, Lucas K Smith, Julien Couthouis, Christopher P Chen, Irena J Roy, Geraldine Gontier, Saul A Villeda

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. DNA Methylation in Long-Term Memory.Physiology (Bethesda, Md.) · 2025
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Neuronal activation of GCell reports · 2023
    Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Karishma J B PrattDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA; Developmental and Stem Cell Biology Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA.
Jeremy M SheaDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA.
Laura Remesal-GomezDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA.
Gregor BieriDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA.
Lucas K SmithDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA; Biomedical Sciences Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA.
Julien CouthouisDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Christopher P ChenDevelopmental and Stem Cell Biology Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA.
Irena J RoyDevelopmental and Stem Cell Biology Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA.
Geraldine GontierDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA. Electronic address: gontier.geraldine@gmail.com.
Saul A VilledaDepartment of Anatomy, University of California San Francisco, 513 Parnassus Avenue, Box 0452, San Francisco, CA 94143, USA; Developmental and Stem Cell Biology Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA; Biomedical Sciences Graduate Program, University of California San Francisco, San Francisco, CA 94143, USA; Department of Physical Therapy and Rehabilitation Science, San Francisco, CA 94143, USA; Bakar Aging Research Institute, San Francisco, CA 94143, USA. Electronic address: saul.villeda@ucsf.edu.
University of California, San Francisco · USStanford University · US

Funding

Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GERMAN, MICHAEL S · 2003 to 2019
$21.8M
PREDOCTORAL TRAINING IN DEVELOPMENTAL BIOLOGYT32HD007470 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Todd Nystul · 1994 to 2026
$7.7M
Pro-youthful role of Gpld1 on regenerative and cognitive function in the aged brainR01AG077770 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SAUL A VILLEDA · 2022 to 2026
$3.2M
Role of O-GlcNAcylation in Regulating Neurodegeneration in Aging and Alzheimer’s DiseaseRF1AG062357 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI VILLEDA, SAUL A · 2018 to 2018
$2.0M
Investigating the role of the microenvironment in microglial agingF32AG055292 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SHEA, JEREMY MICHAEL · 2017 to 2019
$184k
NIA NIH HHS F32 AG055292NIA NIH HHS R01 AG077770NIA NIH HHS RF1 AG062357NICHD NIH HHS T32 HD007470NIDDK NIH HHS P30 DK063720
6 · The paper itself

Abstract

DNA methylation has emerged as a critical modulator of neuronal plasticity and cognitive function. Notwithstanding, the role of enzymes that demethylate DNA remain to be fully explored. Here, we report that loss of ten-eleven translocation methylcytosine dioxygenase 2 (Tet2), which catalyzes oxidation of 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC), in adult neurons enhances cognitive function. In the adult mouse hippocampus, we detected an enrichment of Tet2 in neurons. Viral-mediated neuronal overexpression and RNA interference of Tet2 altered dendritic complexity and synaptic-plasticity-related gene expression in vitro. Overexpression of neuronal Tet2 in adult hippocampus, and loss of Tet2 in adult glutamatergic neurons, resulted in differential hydroxymethylation associated with genes involved in synaptic transmission. Functionally, overexpression of neuronal Tet2 impaired hippocampal-dependent memory, while loss of neuronal Tet2 enhanced memory. Ultimately, these data identify neuronal Tet2 as a molecular target to boost cognitive function.

Indexed as

DioxygenasesProto-Oncogene Proteins5-MethylcytosineAnimalsCognitionDNA-Binding ProteinsDNA MethylationHippocampusMiceNeurons5-MethylcytosineDioxygenasesDNA-Binding ProteinsProto-Oncogene ProteinsTet2 protein, mousechromatincognitionCP: Molecular biologyCP: NeuroscienceepigeneticshippocampushydroxymethylationmemorymethylationneuronsTET2

Identifiers

PMID36351399
PMCPMC10032941
OpenAlexW4308515323

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.