Evidence map›Paper›PMID 36350833›Full record

ArticlePLoS genetics2022

Ydj1 interaction at nucleotide-binding-domain of yeast Ssa1 impacts Hsp90 collaboration and client maturation.

Deepika Gaur, Navinder Kumar, Abhirupa Ghosh, Prashant Singh, Pradeep Kumar, Jyoti Guleria, Satinderdeep Kaur, Nikhil Malik, Sudipto Saha, Thomas Nystrom and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Deepika GaurCouncil of Scientific and Industrial Research-Institute of Microbial Technology, Chandigarh, India.ORCID 0000-0002-4091-1680
Navinder KumarInstitute for Biomedicine, Sahlgrenska Academy, Centre for Ageing and Health-Age Cap, University of Gothenburg, Gothenburg, Sweden.
Abhirupa GhoshDivision of Bioinformatics, Bose Institute, Kolkata, India.
Prashant SinghCouncil of Scientific and Industrial Research-Institute of Microbial Technology, Chandigarh, India.
Pradeep KumarCouncil of Scientific and Industrial Research-Institute of Microbial Technology, Chandigarh, India.
Jyoti GuleriaCouncil of Scientific and Industrial Research-Institute of Microbial Technology, Chandigarh, India.
Satinderdeep KaurPharmacology Department, School of Science and Technology, Nottingham Trent University, Nottingham, United Kingdom.
Nikhil MalikDepartment of Biochemistry, School of Interdisciplinary and Applied Life Sciences, Central University of Haryana, Mahendergarh, India.
Sudipto SahaDivision of Bioinformatics, Bose Institute, Kolkata, India.ORCID 0000-0001-9433-8894
Thomas NystromInstitute for Biomedicine, Sahlgrenska Academy, Centre for Ageing and Health-Age Cap, University of Gothenburg, Gothenburg, Sweden.
Deepak SharmaCouncil of Scientific and Industrial Research-Institute of Microbial Technology, Chandigarh, India.ORCID 0000-0003-1104-575X
Institute of Microbial Technology · INBose Institute · INUniversity of Gothenburg · SECentral University of Haryana · INNottingham Trent University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hsp90 constitutes one of the major chaperone machinery in the cell. The Hsp70 assists Hsp90 in its client maturation though the underlying basis of the Hsp70 role remains to be explored. In the present study, using S. cerevisiae strain expressing Ssa1 as sole Ssa Hsp70, we identified novel mutations in the nucleotide-binding domain of yeast Ssa1 Hsp70 (Ssa1-T175N and Ssa1-D158N) that adversely affect the maturation of Hsp90 clients v-Src and Ste11. The identified Ssa1 amino acids critical for Hsp90 function were also found to be conserved across species such as in E.coli DnaK and the constitutive Hsp70 isoform (HspA8) in humans. These mutations are distal to the C-terminus of Hsp70, that primarily mediates Hsp90 interaction through the bridge protein Sti1, and proximal to Ydj1 (Hsp40 co-chaperone of Hsp70 family) binding region. Intriguingly, we found that the bridge protein Sti1 is critical for cellular viability in cells expressing Ssa1-T175N (A1-T175N) or Ssa1-D158N (A1-D158N) as sole Ssa Hsp70. The growth defect was specific for sti1Δ, as deletion of none of the other Hsp90 co-chaperones showed lethality in A1-T175N or A1-D158N. Mass-spectrometry based whole proteome analysis of A1-T175N cells lacking Sti1 showed an altered abundance of various kinases and transcription factors suggesting compromised Hsp90 activity. Further proteomic analysis showed that pathways involved in signaling, signal transduction, and protein phosphorylation are markedly downregulated in the A1-T175N upon repressing Sti1 expression using doxycycline regulatable promoter. In contrast to Ssa1, the homologous mutations in Ssa4 (Ssa4-T175N/D158N), the stress inducible Hsp70 isoform, supported cell growth even in the absence of Sti1. Overall, our data suggest that Ydj1 competes with Hsp90 for binding to Hsp70, and thus regulates Hsp90 interaction with the nucleotide-binding domain of Hsp70. The study thus provides new insight into the Hsp70-mediated regulation of Hsp90 and broadens our understanding of the intricate complexities of the Hsp70-Hsp90 network.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsHumansMAP Kinase Kinase KinasesMolecular ChaperonesNucleotidesProtein BindingProteomicsAdenosine TriphosphatasesHSP40 Heat-Shock ProteinsHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsMAP Kinase Kinase KinasesMolecular ChaperonesNucleotidesSaccharomyces cerevisiae ProteinsSSA1 protein, S cerevisiaeSSA4 protein, S cerevisiaeSte11 protein, S cerevisiaeYDJ1 protein, S cerevisiae

Identifiers

PMID36350833
PMCPMC9645627
OpenAlexW4308623174

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.