Evidence map›Paper›PMID 36347866›Full record

ArticleNature communications2022

Regulation of BRCA1 stability through the tandem UBX domains of isoleucyl-tRNA synthetase 1.

Scisung Chung, Mi-Sun Kang, Dauren S Alimbetov, Gil-Im Mun, Na-Oh Yunn, Yunjin Kim, Byung-Gyu Kim, Minwoo Wie, Eun A Lee, Jae Sun Ra and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 2 countries.

Scisung ChungDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0001-8399-1433
Mi-Sun KangCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0003-3629-2589
Dauren S AlimbetovDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio, San Antonio, TX, 78229, USA.
Gil-Im MunGraduate School of Pharmaceutical Sciences, Ewha Womans University, Seoul, Republic of Korea.ORCID 0000-0001-6791-5246
Na-Oh YunnPostech Biotech Center, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-0675-4183
Yunjin KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-4865-2345
Byung-Gyu KimCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0002-1152-4542
Minwoo WieCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.
Eun A LeeCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0002-5463-8451
Jae Sun RaCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea.ORCID 0000-0001-9588-3544
Jung-Min OhDepartment of Oral Biochemistry, School of Dentistry, Pusan National University, Pusan, Republic of Korea.
Donghyun LeeDepartment of Mechanical Engineering, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-0682-0830
Keondo LeeDepartment of Mechanical Engineering, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-2140-1626
Jihan KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-8112-3832
Seung Hyun HanDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.
Kyong-Tai KimDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.
Wan Kyun ChungDepartment of Mechanical Engineering, Pohang University of Science and Technology, Pohang, Republic of Korea.
Ki Hyun NamDivision of Biotechnology, Korea University, Seoul, Republic of Korea.ORCID 0000-0003-3268-354X
Jaehyun ParkPohang Accelerator Laboratory, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0002-9007-4892
ByungHoon LeeDepartment of New Biology, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu, Republic of Korea.ORCID 0000-0002-7101-0471
Sunghoon KimInstitute for Artificial Intelligence and Biomedical Research, College of Pharmacy, Gangnam Severance Hospital, Yonsei University, Incheon, 21983, Republic of Korea.ORCID 0000-0002-1570-3230
Weixing ZhaoDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio, San Antonio, TX, 78229, USA.
Sung Ho RyuDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea.ORCID 0000-0003-0913-3048
Yun-Sil LeeGraduate School of Pharmaceutical Sciences, Ewha Womans University, Seoul, Republic of Korea.ORCID 0000-0002-7538-8850
Kyungjae MyungCenter for Genomic Integrity, Institute for Basic Science (IBS), Ulsan, 44919, Republic of Korea. kmyung@ibs.re.kr.ORCID 0000-0001-7975-6190
Yunje ChoDepartment of Life Sciences, Pohang University of Science and Technology, Pohang, Republic of Korea. yunje@postech.ac.kr.ORCID 0000-0001-6481-1716
Pohang University of Science and Technology · KRInstitute for Basic Science · KREwha Womans University · KRThe University of Texas Health Science Center at San Antonio · USDaegu Gyeongbuk Institute of Science and Technology · KRKorea University · KRPusan National University · KRYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aminoacyl-tRNA synthetases (ARSs) have evolved to acquire various additional domains. These domains allow ARSs to communicate with other cellular proteins in order to promote non-translational functions. Vertebrate cytoplasmic isoleucyl-tRNA synthetases (IARS1s) have an uncharacterized unique domain, UNE-I. Here, we present the crystal structure of the chicken IARS1 UNE-I complexed with glutamyl-tRNA synthetase 1 (EARS1). UNE-I consists of tandem ubiquitin regulatory X (UBX) domains that interact with a distinct hairpin loop on EARS1 and protect its neighboring proteins in the multi-synthetase complex from degradation. Phosphomimetic mutation of the two serine residues in the hairpin loop releases IARS1 from the complex. IARS1 interacts with BRCA1 in the nucleus, regulates its stability by inhibiting ubiquitylation via the UBX domains, and controls DNA repair function.

Indexed as

Amino Acyl-tRNA SynthetasesIsoleucine-tRNA LigaseGlutamate-tRNA LigaseRNA, TransferAmino Acyl-tRNA SynthetasesGlutamate-tRNA LigaseIsoleucine-tRNA LigaseRNA, Transfer

Identifiers

PMID36347866
PMCPMC9643514
OpenAlexW4308775203

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.