Evidence map›Paper›PMID 36347497›Full record

ArticleJournal of global antimicrobial resistance2022

HIV-1 resistance against dolutegravir fluctuates rapidly alongside erratic treatment adherence: a case report.

Jeroen J A van Kampen, Hanh Thi Pham, Sunbin Yoo, Ronald J Overmars, Cynthia Lungu, Rizwan Mahmud, Carolina A M Schurink, Sander van Boheemen, Rob A Gruters, Pieter L A Fraaij and 5 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of global antimicrobial resistance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. ACS infectious diseases · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Jeroen J A van KampenViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Hanh Thi PhamDepartment of Microbiology and Immunology, McGill University, Canada.
Sunbin YooDepartment of Microbiology and Immunology, McGill University, Canada.
Ronald J OvermarsViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Cynthia LunguViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Rizwan MahmudViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Carolina A M SchurinkDepartment of Medical Microbiology and Infectious Diseases, Erasmus Medical Center, Rotterdam, The Netherlands; Department of Internal Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
Sander van BoheemenViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Rob A GrutersViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Pieter L A FraaijViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands; Department of Pediatrics, Subdivision Infectious Diseases and Immunology, Sophia's Children Hospital, Erasmus Medical Center, Rotterdam, The Netherlands.
David M BurgerDepartment of Pharmacy, Radboud Institute for Health Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
Jolanda J C VoermansViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Casper RokxDepartment of Medical Microbiology and Infectious Diseases, Erasmus Medical Center, Rotterdam, The Netherlands; Department of Internal Medicine, Erasmus Medical Center, Rotterdam, The Netherlands.
David A M C van de VijverViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Thibault MesplèdeViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands. Electronic address: t.mesplede@erasmusmc.nl.
Erasmus MC · NLMcGill University · CARadboud University Nijmegen · NL

Funding

Novel mechanisms contributing to failure of dolutegravir-containing cART in clinical practiceR01AI147330 · NIAID · ERASMUS MEDICAL CENTER · PI VAN DE VIJVER, DAVID · 2019 to 2023
$3.2M
NIAID NIH HHS R01 AI147330
6 · The paper itself

Abstract

objectivesWe report a case of incomplete HIV-1 suppression on a dolutegravir, lamivudine, and abacavir single-tablet regimen with the emergence of the H51Y and G118R integrase resistance mutations.

methodsIntegrase sequencing was performed retrospectively by Sanger and next-generation sequencing. Rates of emergence and decline of resistance mutations were calculated using next-generation sequencing data. Dolutegravir plasma concentrations were measured by ultra-performance liquid chromatography-tandem mass spectrometry. The effects of H51Y and G118R on infectivity, fitness, and susceptibility to dolutegravir were quantified using cell-based assays.

resultsDuring periods of non-adherence to treatment, mutations were retrospectively documented only by next-generation sequencing. Misdiagnosis by Sanger sequencing was caused by the rapid decline of mutant strains within the retroviral population. This observation was also true for a M184V lamivudine-resistant reverse transcriptase mutation found in association with integrase mutations on single HIV genomes. Resistance rebound upon treatment re-initiation was swift (>8000 copies per day). Next-generation sequencing indicated cumulative adherence to treatment. Compared to WT HIV-1, relative infectivity was 73%, 38%, and 43%; relative fitness was 100%, 35%, and 10% for H51Y, G118R, and H51Y+G118R viruses, respectively. H51Y did not change the susceptibility to dolutegravir, but G188R and H51Y+G118R conferred 7- and 28-fold resistance, respectively.

conclusionThis case illustrates how poorly-fit drug-resistant viruses wax and wane alongside erratic treatment adherence and are easily misdiagnosed by Sanger sequencing. We recommend next-generation sequencing to improve the clinical management of incomplete virological suppression with dolutegravir.

Indexed as

HIV-1HIV IntegraseDolutegravirDrug Resistance, ViralHumansLamivudineRetrospective StudiesTreatment Adherence and ComplianceDolutegravirHIV IntegraseLamivudineDolutegravirDrug resistanceHIVMutationsNext-generation sequencingTreatment adherence

Identifiers

PMID36347497
PMCPMC10258191
OpenAlexW4308263533

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.