Evidence map›Paper›PMID 36346225›Full record

ArticleMicrobiology spectrum2022

Comparison of Nasopharyngeal and Saliva Swab Nucleic Acid Amplification and Rapid Antigen Testing To Detect Omicron SARS-CoV-2 Variant of Concern: a Prospective Clinical Trial (OMICRON).

Antonios Kritikos, Giorgia Caruana, Catherine Lazor-Blanchet, Michael Currat, Jean-Daniel Chiche, Peter Vollenweider, Pierre-Alexandre Bart, Onya Opota, Gilbert Greub

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Antonios Kritikos *Institute of Microbiology, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Giorgia Caruana *Institute of Microbiology, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Catherine Lazor-BlanchetOccupational Health Service, Lausanne University Hospital, Lausanne, Switzerland.
Michael CurratOccupational Health Service, Lausanne University Hospital, Lausanne, Switzerland.
Jean-Daniel ChicheIntensive Care Unit, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Peter VollenweiderService of Internal Medicine, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Pierre-Alexandre BartService of Internal Medicine, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Onya OpotaInstitute of Microbiology, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
Gilbert GreubInstitute of Microbiology, Lausanne University Hospital and University of Lausannegrid.9851.5, Lausanne, Switzerland.
University of Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In November 2021, the World Health Organization declared the Omicron variant (B.1.1.519) a variant of concern. Since then, worries have been expressed regarding the ability of usual diagnostic tests to detect the Omicron variant. In addition, some recently published data suggested that the salivary reverse transcription (RT)-PCR might perform better than the current gold standard, nasopharyngeal (NP) RT-PCR. In this study, we aimed to compare the sensitivities of nasopharyngeal and saliva RT-PCR and assess the diagnostic performances of rapid antigen testing (RAT) in nasopharyngeal and saliva samples. We conducted a prospective clinical study among symptomatic health care professionals consulting the occupational health service of our hospital for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) screening and hospitalized patients in internal medicine/intensive care wards screened for SARS-CoV-2 with COVID-19-compatible symptoms. A composite outcome considering NP PCR and/or saliva PCR was used as a reference standard to define COVID-19 cases. A total of 475 paired NP/saliva specimens have been collected with a positivity rate of 40% (

Indexed as

COVID-19Nucleic AcidsHumansProspective StudiesSalivaSARS-CoV-2Specimen HandlingNucleic Acidsnasopharyngeal swabOmicron variantrapid antigen testingRT-PCRsaliva swabSARS-CoV-2 diagnosis

Identifiers

PMID36346225
PMCPMC9769748
OpenAlexW4308507973

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.