Evidence map›Paper›PMID 36345344›Full record

ArticleiScience2022

Defining the origin, evolution, and immune composition of SDH-deficient renal cell carcinoma.

Joana B Neves, Kirsty Roberts, Janani Sivakumaran Nguyen, Soha El Sheikh, My-Anh Tran-Dang, Catherine Horsfield, Faiz Mumtaz, Peter Campbell, Hans Stauss, Maxine G B Tran and 1 more

Abstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Joana B NevesUCL Division of Surgery and Interventional Science, Royal Free Hospital, London, UK.
Kirsty RobertsWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Janani Sivakumaran NguyenUCL Institute of Immunity & Transplantation, The Pears Building, Pond Street, London, UK.
Soha El SheikhDepartment of Histopathology, Royal Free Hospital, London, UK.
My-Anh Tran-DangDepartment of Histopathology, Royal Free Hospital, London, UK.
Catherine HorsfieldGuy's & St Thomas' National Health Service Trust, Westminster Bridge Road, London, UK.
Faiz MumtazUCL Division of Surgery and Interventional Science, Royal Free Hospital, London, UK.
Peter CampbellWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
Hans StaussUCL Institute of Immunity & Transplantation, The Pears Building, Pond Street, London, UK.
Maxine G B TranUCL Division of Surgery and Interventional Science, Royal Free Hospital, London, UK.
Thomas MitchellWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.

Funding

Cancer Research UK 27176Medical Research Council MR/S00209X/1Wellcome Trust
6 · The paper itself

Abstract

Succinate dehydrogenase (SDH)-deficient renal cell carcinoma represents a rare subtype of hereditary kidney cancer. Clinical diagnosis can be challenging and there is little evidence to guide systemic therapeutic options. We performed genomic profiling of a cohort of tumors through the analysis of whole genomes, transcriptomes, as well as flow cytometry and immunohistochemistry in order to gain a deeper understanding of their molecular biology. We find neutral evolution after early tumor activation with a lack of secondary driver events. We show that these tumors have epithelial derivation, possibly from the macula densa, a specialized paracrine cell of the renal juxtaglomerular apparatus. They subsequently develop into immune excluded tumors. We provide transcriptomic and protein expression evidence of a highly specific tumor marker, PAPPA2. These translational findings have implications for the diagnosis and treatment for this rare tumor subtype.

Indexed as

CancerCancer systems biologyGenomics

Identifiers

PMID36345344
PMCPMC9636038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.