Evidence map›Paper›PMID 36344846›Full record

ArticleNature structural & molecular biology2022

The transcriptional terminator XRN2 and the RNA-binding protein Sam68 link alternative polyadenylation to cell cycle progression in prostate cancer.

Marco Pieraccioli, Cinzia Caggiano, Luca Mignini, Chuwei Zhong, Gabriele Babini, Rossano Lattanzio, Savino Di Stasi, Bin Tian, Claudio Sette, Pamela Bielli

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  7. The role of CSTF2 in gastric cancer: implications for therapy.European journal of medical research · 2025
    Article
  8. Article
  9. Role of Sam68 in different types of cancer (Review).International journal of molecular medicine · 2025
    Review
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  16. Review
  17. Role of the RNA-binding protein family in gynecologic cancers.American journal of cancer research · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Marco PieraccioliDepartment of Neuroscience, Section of Human Anatomy, Catholic University of the Sacred Hearth, Rome, Italy.ORCID http://orcid.org/0000-0003-3995-535X
Cinzia CaggianoDepartment of Neuroscience, Section of Human Anatomy, Catholic University of the Sacred Hearth, Rome, Italy.
Luca MigniniDepartment of Biomedicine and Prevention, University of Rome Tor Vergata, Rome, Italy.
Chuwei ZhongGene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA, USA.
Gabriele BabiniGSTEP-Organoids Core Facility, Fondazione Policlinico Agostino Gemelli IRCCS, Rome, Italy.
Rossano LattanzioDepartment of Innovative Technologies in Medicine & Dentistry, G. d'Annunzio University, Chieti, Italy.
Savino Di StasiDepartment of Experimental Medicine and Surgery, University of Rome Tor Vergata, Rome, Italy.
Bin TianGene Expression and Regulation Program, The Wistar Institute, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0001-8903-8256
Claudio Sette *Department of Neuroscience, Section of Human Anatomy, Catholic University of the Sacred Hearth, Rome, Italy. claudio.sette@unicatt.it.ORCID http://orcid.org/0000-0003-2864-8266
Pamela Bielli *Department of Biomedicine and Prevention, University of Rome Tor Vergata, Rome, Italy. pamela.bielli@uniroma2.it.ORCID http://orcid.org/0000-0003-3347-8345
University of Rome Tor Vergata · ITAgostino Gemelli University Polyclinic · ITThe Wistar Institute · USUniversità Cattolica del Sacro Cuore · ITUniversity of Chieti-Pescara · IT

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
Regulation of Alternative Cleavage and PolyadenylationR01GM084089 · NIGMS · WISTAR INSTITUTE · PI TIAN, BIN · 2008 to 2023
$6.7M
Regulation and Functions of 3'UTRs in Cellular StressR01GM129069 · NIGMS · WISTAR INSTITUTE · PI TIAN, BIN · 2018 to 2021
$1.5M
NCI NIH HHS P30 CA010815NIGMS NIH HHS R01 GM084089NIGMS NIH HHS R01 GM129069
6 · The paper itself

Abstract

Alternative polyadenylation (APA) yields transcripts differing in their 3'-end, and its regulation is altered in cancer, including prostate cancer. Here we have uncovered a mechanism of APA regulation impinging on the interaction between the exonuclease XRN2 and the RNA-binding protein Sam68, whose increased expression in prostate cancer is promoted by the transcription factor MYC. Genome-wide transcriptome profiling revealed a widespread impact of the Sam68/XRN2 complex on APA. XRN2 promotes recruitment of Sam68 to its target transcripts, where it competes with the cleavage and polyadenylation specificity factor for binding to strong polyadenylation signals at distal ends of genes, thus promoting usage of suboptimal proximal polyadenylation signals. This mechanism leads to 3' untranslated region shortening and translation of transcripts encoding proteins involved in G1/S progression and proliferation. Thus, our findings indicate that the APA program driven by Sam68/XRN2 promotes cell cycle progression and may represent an actionable target for therapeutic intervention.

Indexed as

PolyadenylationProstatic Neoplasms3' Untranslated RegionsAdaptor Proteins, Signal TransducingCell CycleCell Cycle ProteinsDNA-Binding ProteinsExoribonucleasesHumansMaleRNA-Binding Proteins3' Untranslated RegionsAdaptor Proteins, Signal TransducingCell Cycle ProteinsDNA-Binding ProteinsExoribonucleasesKHDRBS1 protein, humanRNA-Binding ProteinsXRN2 protein, human

Identifiers

PMID36344846
PMCPMC9872553
OpenAlexW4308458887

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.