Evidence map›Paper›PMID 36344755›Full record

ArticleArchives of microbiology2022

Genetic diversity and population structure of Saccharomyces cerevisiae isolated from Turkish sourdough by iPBS-retrotransposons markers.

Furkan Aydın, Göksel Özer, Mehtap Alkan, İbrahim Çakır

Abstract read
In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Comparative adaptability of 307Frontiers in microbiology · 2025
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Furkan AydınDepartment of Food Engineering, Faculty of Engineering, Aksaray University, 68100, Aksaray, Turkey.ORCID http://orcid.org/0000-0003-2924-5434
Göksel ÖzerDepartment of Plant Protection, Faculty of Agriculture, Bolu Abant Izzet Baysal University, 14030, Bolu, Turkey.ORCID http://orcid.org/0000-0002-3385-2520
Mehtap AlkanDepartment of Plant Protection, Faculty of Agriculture, Bolu Abant Izzet Baysal University, 14030, Bolu, Turkey.ORCID http://orcid.org/0000-0002-7923-8892
İbrahim ÇakırDepartment of Food Engineering, Faculty of Engineering, Bolu Abant Izzet Baysal University, 14030, Bolu, Turkey. ibrahimcakir@ibu.edu.tr.ORCID http://orcid.org/0000-0001-7775-1871

Funding

Türkiye Bilimsel ve Teknolojik Araştirma Kurumu 121O580
6 · The paper itself

Abstract

Molecular DNA markers are valuable tools for analyzing genetic variation among yeast from different populations to reveal the genetically different autochthonous strains. In this study, we employed inter-primer binding site (iPBS) retrotransposon polymorphism to assess the genetic variation and population structure of 96 Saccharomyces cerevisiae isolates from four different regions in Turkey. The nine selected iPBS primers amplified 102 reproducible and scorable bands, of which 95.10% were polymorphic with an average of 10.78 polymorphic fragments per primer. The average polymorphism information content and the resolving power were 0.26-3.58, respectively. Analysis of molecular variance (AMOVA) revealed significant (P < 0.001) genetic differences within populations (88%) and between populations (12%). The unweighted pair group mean with arithmetic (UPGMA) dendrogram grouped 96 S. cerevisiae strains into two main clusters, where the highest probability of the data elucidating the population structure was obtained at ΔK = 2. There was not an obvious genetic discrimination of the populations according to geographical regions on UPGMA, supported by principal coordinate analysis. However, the individuals of the closer provinces in each population were more likely to group together or closely. The results indicate that iPBS polymorphism is a useful tool to reveal the genetically diverse autochthonous S. cerevisiae strains that may be important for the production of sourdough or baked goods.

Indexed as

RetroelementsSaccharomyces cerevisiaeBinding SitesGenetic MarkersGenetic VariationPhylogenyTurkeyGenetic MarkersRetroelementsHeterogeneityiPBSMarkerRetrotransposonsSourdoughYeast

Identifiers

PMID36344755
PMCPMC9640837

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.