Evidence map›Paper›PMID 36344522›Full record

SynthesisNature communications2022

Discerning asthma endotypes through comorbidity mapping.

Gengjie Jia, Xue Zhong, Hae Kyung Im, Nathan Schoettler, Milton Pividori, D Kyle Hogarth, Anne I Sperling, Steven R White, Edward T Naureckas, Christopher S Lyttle and 9 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Update on the genetics of allergic diseases.The Journal of allergy and clinical immunology · 2025
    Review
  6. Article
  7. Article
  8. Current Review of Comorbidities in Chronic Rhinosinusitis.Current allergy and asthma reports · 2024
    Review
  9. Asthma-Genomic Advances Toward Risk Prediction.Clinics in chest medicine · 2024
    Review
  10. Article
  11. Article
  12. Genetics of chronic respiratory disease.Nature reviews. Genetics · 2024
    Review
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Gengjie JiaDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.
Xue ZhongDepartment of Medicine and Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.
Hae Kyung ImDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0003-0333-5685
Nathan SchoettlerDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.
Milton PividoriDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0002-3035-4403
D Kyle HogarthDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0001-8925-7360
Anne I SperlingDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0002-4265-9212
Steven R WhiteDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.
Edward T NaureckasDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.
Christopher S LyttleDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0002-5202-5838
Chikashi TeraoRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.ORCID 0000-0002-6452-4095
Yoichiro KamataniRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.ORCID 0000-0001-8748-5597
Masato AkiyamaRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Koichi MatsudaDepartment of Computational Biology and Medical Sciences, Graduate school of Frontier Sciences, The University of Tokyo, Tokyo, 108-8639, Japan.ORCID 0000-0001-7292-2686
Michiaki KuboRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.ORCID 0000-0002-0095-2322
Nancy J CoxDepartment of Medicine and Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.
Carole OberDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA. c-ober@bsd.uchicago.edu.
Andrey RzhetskyDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA. arzhetsky@uchicago.edu.ORCID 0000-0001-6959-7405
Julian SolwayDepartment of Medicine, University of Chicago, Chicago, IL, 60637, USA. jsolway@medicine.bsd.uchicago.edu.ORCID 0000-0002-0898-8530
University of Chicago · USRIKEN Center for Integrative Medical Sciences · JPVanderbilt University Medical Center · USKyushu University · JPThe University of Tokyo · JPUniversity of Shizuoka · JP

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
The Institute for Translational MedicineUL1TR002389 · NCATS · UNIVERSITY OF CHICAGO · PI Joshua J Jacobs, DAVID O MELTZER · 2017 to 2026
$71.6M
Wisconsin Infant Study Cohort (WISC) ECHO Pediatric Follow-UpUH3OD023282 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern · 2018 to 2026
$64.8M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
New Approaches for Empowering Studies of Asthma in Populations of African DescentR01HL104608 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI BARNES, KATHLEEN C, KENNY, EIMEAR ELIZABETH · 2011 to 2022
$23.1M
Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI Matthew J Brady · 2013 to 2026
$20.9M
Wisconsin Infant Study Cohort (WISC) ECHO Pediatric Follow-UpUG3OD023282 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E. · 2016 to 2024
$19.3M
Pharmacogenomics of Arrhythmia TherapyU19HL065962 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RODEN, DAN M · 2010 to 2014
$17.4M
Understanding and preventing HLA-associated drug reactionsP50GM115305 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PHILLIPS, ELIZABETH, RODEN, DAN M · 2015 to 2019
$13.0M
Project-003U19AI162310 · NIAID · UNIVERSITY OF CHICAGO · PI Marcelo A. Nobrega, Carole Ober · 2021 to 2026
$10.6M
Regulation and expression of HLA-G in asthmatic airwaysU19AI095230 · NIAID · UNIVERSITY OF CHICAGO · PI OBER, CAROLE · 2011 to 2016
$10.5M
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NCATS NIH HHS UL1 TR000445NCATS NIH HHS UL1 TR002243NCATS NIH HHS UL1 TR002389NCRR NIH HHS S10 RR025141NCRR NIH HHS UL1 RR024975NHGRI NIH HHS R01 HG012271NHGRI NIH HHS U01 HG004798NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG009086NHLBI NIH HHS K08 HL153955NHLBI NIH HHS L30 HL154452NHLBI NIH HHS R01 HL104608NHLBI NIH HHS R01 HL122712NHLBI NIH HHS R01 HL129735NHLBI NIH HHS U01 HL108634NHLBI NIH HHS U19 HL065962NIAID NIH HHS U19 AI095230NIAID NIH HHS U19 AI162310NICHD NIH HHS R01 HD074711NIDDK NIH HHS P30 DK020595NIGMS NIH HHS P50 GM115305NIGMS NIH HHS RC2 GM092618NIH HHS S10 OD017985NIH HHS UG3 OD023282NIH HHS UH3 OD023282NIMH NIH HHS R01 MH107666NIMH NIH HHS R01 MH113362NINDS NIH HHS R01 NS032830ODCDC CDC HHS UG3 OD023282
6 · The paper itself

Abstract

Asthma is a heterogeneous, complex syndrome, and identifying asthma endotypes has been challenging. We hypothesize that distinct endotypes of asthma arise in disparate genetic variation and life-time environmental exposure backgrounds, and that disease comorbidity patterns serve as a surrogate for such genetic and exposure variations. Here, we computationally discover 22 distinct comorbid disease patterns among individuals with asthma (asthma comorbidity subgroups) using diagnosis records for >151 M US residents, and re-identify 11 of the 22 subgroups in the much smaller UK Biobank. GWASs to discern asthma risk loci for individuals within each subgroup and in all subgroups combined reveal 109 independent risk loci, of which 52 are replicated in multi-ancestry meta-analysis across different ethnicity subsamples in UK Biobank, US BioVU, and BioBank Japan. Fourteen loci confer asthma risk in multiple subgroups and in all subgroups combined. Importantly, another six loci confer asthma risk in only one subgroup. The strength of association between asthma and each of 44 health-related phenotypes also varies dramatically across subgroups. This work reveals subpopulations of asthma patients distinguished by comorbidity patterns, asthma risk loci, gene expression, and health-related phenotypes, and so reveals different asthma endotypes.

Indexed as

AsthmaComorbidityGenome-Wide Association StudyHumansJapanPhenotype

Identifiers

PMID36344522
PMCPMC9640644
OpenAlexW4308469653

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.