Evidence map›Paper›PMID 36338942›Full record

ArticleFrontiers in neuroinformatics2022

Black-box and surrogate optimization for tuning spiking neural models of striatum plasticity.

Nicolás C Cruz, Álvaro González-Redondo, Juana L Redondo, Jesús A Garrido, Eva M Ortigosa, Pilar M Ortigosa

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In one paragraph

Article in Frontiers in neuroinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Nicolás C CruzDepartment of Computer Engineering, Automation and Robotics, University of Granada, Granada, Spain.
Álvaro González-RedondoDepartment of Computer Engineering, Automation and Robotics, University of Granada, Granada, Spain.
Juana L RedondoDepartment of Informatics, University of Almería, ceiA3 Excellence Agri-food Campus, Almeria, Spain.
Jesús A GarridoDepartment of Computer Engineering, Automation and Robotics, University of Granada, Granada, Spain.
Eva M OrtigosaDepartment of Computer Engineering, Automation and Robotics, University of Granada, Granada, Spain.
Pilar M OrtigosaDepartment of Informatics, University of Almería, ceiA3 Excellence Agri-food Campus, Almeria, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The basal ganglia (BG) is a brain structure that has long been proposed to play an essential role in action selection, and theoretical models of spiking neurons have tried to explain how the BG solves this problem. A recently proposed functional and biologically inspired network model of the striatum (an important nucleus of the BG) is based on spike-timing-dependent eligibility (STDE) and captured important experimental features of this nucleus. The model can recognize complex input patterns and consistently choose rewarded actions to respond to such sensory inputs. However, model tuning is challenging due to two main reasons. The first is the expert knowledge required, resulting in tedious and potentially biased trial-and-error procedures. The second is the computational cost of assessing model configurations (approximately 1.78 h per evaluation). This study addresses the model tuning problem through numerical optimization. Considering the cost of assessing solutions, the selected methods stand out due to their low requirements for solution evaluations and compatibility with high-performance computing. They are the SurrogateOpt solver of Matlab and the RBFOpt library, both based on radial basis function approximations, and DIRECT-GL, an enhanced version of the widespread black-box optimizer DIRECT. Besides, a parallel random search serves as a baseline reference of the outcome of opting for sophisticated methods. SurrogateOpt turns out to be the best option for tuning this kind of model. It outperforms, on average, the quality of the configuration found by an expert and works significantly faster and autonomously. RBFOpt and the random search share the second position, but their average results are below the option found by hand. Finally, DIRECT-GL follows this line becoming the worst-performing method.

Indexed as

black-box optimizationdopaminemodel tuningreinforcement learningspike-timing dependent plasticity (STDP)spiking neural networksstriatumsurrogate optimization

Identifiers

PMID36338942
PMCPMC9630480

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.