Evidence map›Paper›PMID 36336729›Full record

ArticleInternational microbiology : the official journal of the Spanish Society for Microbiology2023

Characteristics of a novel temperate bacteriophage against Staphylococcus arlettae (vB_SarS_BM31).

Guangli Han, Jieru Zhang, Zidan Luo, Biao Lu, Pengfei Zhang, Kang Yong, Yin Wang, Yan Luo, Zexiao Yang, Meishen Ren and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in International microbiology : the official journal of the Spanish Society for Microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Bacteriophage Therapy to Control Bovine Mastitis: A Review.Antibiotics (Basel, Switzerland) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Guangli HanCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Jieru ZhangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Zidan LuoCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Biao LuCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Pengfei ZhangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Kang YongCollege of Animal Science and Technology, Chongqing Three Gorges Vocational College, Chongqing, 404155, China.
Yin WangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Yan LuoCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Zexiao YangCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Meishen RenCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Suizhong CaoCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. suizhongcao@sicau.edu.cn.ORCID http://orcid.org/0000-0003-0741-572X
Xueping YaoCollege of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. yaoxueping74@126.com.ORCID http://orcid.org/0000-0003-2270-8504
Sichuan Agricultural University · CN

Funding

Innovation Research Group on Quality and Safety of Featured Agricultural Products in Three Gorges Reservoir Area CXQTP19037Key R&D Program of the Department of Science and Technology of Gansu Province 20YF8NA029Project of the Department of Science and Technology of Sichuan Province 2019YJ0671
6 · The paper itself

Abstract

backgroundStaphylococcus arlettae is a rarely reported coagulase-negative staphylococcus (CoNS) isolated from infected humans and livestock. Observing phage-bacteria interaction could improve the understanding of bacterial pathogenetic mechanisms, providing foundational evidence for phage therapy or phage detection. Herein, we aimed to characterise and annotate a novel bacteriophage, vB_SarS_BM31 (BM31), specific to S. arlettae. This bacteriophage was isolated from a milk sample associated with bovine mastitis and collected in the Sichuan Province, China.

resultsThe BM31 genome comprised a linear double-stranded DNA of 42,271 base pair in length with a G + C content of 34.59%. A total of 65 open reading frames (ORFs) were assembled from phage DNA, of which 29 were functionally annotated. These functional genes were divided into four modules: the structural, DNA packing and replication, lysis, and lysogeny modules. Holin (ORF25), lysin (ORF26), and integrase (ORF28) were located closely in the entire BM31 genome and were important for lyse or lysogeny cycle of BM31. The phage was identified as a temperate phage according to whole genome analysis and life cycle assay, with basic biological characteristics such as small burst size, short latency period, and narrow host range, consistent with the characteristics of the family Siphoviridae, subcluster B14 of the Staphylococcus bacteriophage.

conclusionsThe present isolation and characterisation of BM31 contributes to the Staphylococcus bacteriophage database and provides a theoretical foundation for its potential applications. To the best of our knowledge, BM31 is the only shared and completely reported phage against S. arlettae in the entire public database.

Indexed as

DNA, ViralGenome, ViralAnimalsCattleFemaleHumansSequence Analysis, DNAStaphylococcusStaphylococcus PhagesDNA, ViralBurst sizeEndolysinIntegraseLysogenyMastitis

Identifiers

PMID36336729
PMCPMC9638216
OpenAlexW4308298870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.