Evidence map›Paper›PMID 36335430›Full record

ArticleBiophysical journal2022

Multivalent binding of the hub protein LC8 at a newly discovered site in 53BP1.

Jesse Howe, Austin Weeks, Patrick Reardon, Elisar Barbar

Open access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jesse HoweDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon.
Austin WeeksDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon.
Patrick ReardonOregon State University NMR Facility, Oregon State University, Corvallis, Oregon.
Elisar BarbarDepartment of Biochemistry and Biophysics, Oregon State University, Corvallis, Oregon. Electronic address: elisar.barbar@oregonstate.edu.
Oregon State University · US

Funding

Multiscale characterization of a unique class of duplex, multivalent IDP systems-- Administrative Supplement to Support Undergraduate Summer Research ExperiencesR01GM141733 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARBAR, ELISAR J, ZUCKERMAN, DANIEL M · 2021 to 2024
$1.9M
Acquisition of a 700 MHz NMR SpectrometerS10OD018518 · OD · OREGON STATE UNIVERSITY · PI BARBAR, ELISAR J · 2015 to 2015
$1.3M
NIGMS NIH HHS R01 GM141733NIH HHS S10 OD018518
6 · The paper itself

Abstract

Tumor suppressor p53 binding protein 1 (53BP1) is a scaffolding protein involved in poly-ADP ribose polymerase inhibitor hypersensitivity in BRCA1-negative cancers. 53BP1 plays a critical role in the DNA damage response and relies on its oligomerization to create foci that promote repair of DNA double-strand breaks. Previous work shows that mutation of either the oligomerization domain or the dynein light chain 8 (LC8)-binding sites of 53BP1 results in reduced accumulation of 53BP1 at double-strand breaks. Mutation of both abolishes focus formation almost completely. Here, we show that, contrary to current literature, 53BP1 contains three LC8-binding sites, all of which are conserved in mammals. Isothermal titration calorimetry measuring binding affinity of 53BP1 variants with LC8 shows that the third LC8-binding site has a high affinity and can bind LC8 in the absence of other sites. NMR titrations confirm that the third site binds LC8 even in variants that lack the other LC8-binding sites. The third site is the closest to the oligomerization domain of 53BP1, and its discovery would challenge our current understanding of the role of LC8 in 53BP1 function.

Indexed as

Tumor Suppressor p53-Binding Protein 1Tumor Suppressor p53-Binding Protein 1

Identifiers

PMID36335430
PMCPMC9748353
OpenAlexW4308294326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.