Evidence map›Paper›PMID 36335218›Full record

ArticleScientific data2022

Pre- and post-surgery brain tumor multimodal magnetic resonance imaging data optimized for large scale computational modelling.

Hannelore Aerts, Nigel Colenbier, Hannes Almgren, Thijs Dhollander, Javier Rasero Daparte, Kenzo Clauw, Amogh Johri, Jil Meier, Jessica Palmer, Michael Schirner and 2 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Hannelore AertsDepartment of Data Analysis, Ghent University, Ghent, Belgium.
Nigel ColenbierDepartment of Data Analysis, Ghent University, Ghent, Belgium.
Hannes AlmgrenDepartment of Data Analysis, Ghent University, Ghent, Belgium.
Thijs DhollanderMurdoch Children's Research Institute | MCRI Research Group for Developmental Imaging, Melbourne, Australia.
Javier Rasero DaparteCoAx Lab, Carnegie Mellon University, Pittsburgh, USA.ORCID 0000-0003-1661-2856
Kenzo ClauwDepartment of Data Analysis, Ghent University, Ghent, Belgium.
Amogh JohriIndraprastha Institute of Information Technology, Delhi, India.
Jil MeierBerlin Institute of Health at Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany.
Jessica PalmerBerlin Institute of Health at Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany.
Michael SchirnerBerlin Institute of Health at Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany.ORCID 0000-0001-8227-8476
Petra RitterBerlin Institute of Health at Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117, Berlin, Germany.
Daniele MarinazzoDepartment of Data Analysis, Ghent University, Ghent, Belgium. daniele.marinazzo@ugent.be.ORCID 0000-0002-9803-0122

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) RI 2073/10-2Deutsche Forschungsgemeinschaft (German Research Foundation) RI 2073/6-1Deutsche Forschungsgemeinschaft (German Research Foundation) RI 2073/9-1EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 683049EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 785907EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 826421EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 945539Federaal Wetenschapsbeleid (Belgian Federal Science Policy Office) P7/11Universiteit Gent (UGent) 01J10715Universiteit Gent (UGent) 01MR0210
6 · The paper itself

Abstract

We present a dataset of magnetic resonance imaging (MRI) data (T1, diffusion, BOLD) acquired in 25 brain tumor patients before the tumor resection surgery, and six months after the surgery, together with the tumor masks, and in 11 controls (recruited among the patients' caregivers). The dataset also contains behavioral and emotional scores obtained with standardized questionnaires. To simulate personalized computational models of the brain, we also provide structural connectivity matrices, necessary to perform whole-brain modelling with tools such as The Virtual Brain. In addition, we provide blood-oxygen-level-dependent imaging time series averaged across regions of interest for comparison with simulation results. An average resting state hemodynamic response function for each region of interest, as well as shape maps for each voxel, are also contributed.

Indexed as

Brain NeoplasmsMagnetic Resonance ImagingBrainBrain MappingComputer SimulationHumans

Identifiers

PMID36335218
PMCPMC9637199

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.