Evidence map›Paper›PMID 36335090›Full record

ArticleCell death discovery2022

Epigenetic mechanisms of Strip2 in differentiation of pluripotent stem cells.

Sureshkumar Perumal Srinivasan, Harshal Nemade, Anna Cherianidou, Luying Peng, Sara Cruz-Molina, Alvaro Rada-Iglesias, Agapios Sachinidis

Open access · goldAbstract read
In one paragraph

Article in Cell death discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Sureshkumar Perumal SrinivasanFaculty of Medicine and University Hospital Cologne, Center for Physiology, Working Group Sachinidis, University of Cologne, 50931, Cologne, Germany.
Harshal NemadeFaculty of Medicine and University Hospital Cologne, Center for Physiology, Working Group Sachinidis, University of Cologne, 50931, Cologne, Germany.
Anna CherianidouFaculty of Medicine and University Hospital Cologne, Center for Physiology, Working Group Sachinidis, University of Cologne, 50931, Cologne, Germany.
Luying PengHeart Health Center, Shanghai East Hospital, School of Medicine, Tongji University, 200120, Shanghai, China.
Sara Cruz-MolinaMax Planck Institute for Molecular Biomedicine, Muenster, Röntgenstraße 20, 48149, Münster, Germany.
Alvaro Rada-IglesiasInstitute of Biomedicine and Biotechnology of Cantabria (IBBTEC), CSIC/University of Cantabria, Santander, Spain.ORCID http://orcid.org/0000-0001-7137-1341
Agapios SachinidisFaculty of Medicine and University Hospital Cologne, Center for Physiology, Working Group Sachinidis, University of Cologne, 50931, Cologne, Germany. a.sachinidis@uni-koeln.de.ORCID http://orcid.org/0000-0003-3054-225X
University of Cologne · DEMax Planck Institute for Molecular Biomedicine · DETongji University · CNUniversidad de Cantabria · ES

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) SA 568/27-1
6 · The paper itself

Abstract

Significant evidence points to Strip2 being a key regulator of the differentiation processes of pluripotent embryonic stem cells. However, Strip2 mediated epigenetic regulation of embryonic differentiation and development is quite unknown. Here, we identified several interaction partners of Strip2, importantly the co-repressor molecular protein complex nucleosome remodeling deacetylase/Tripartite motif-containing 28/Histone deacetylases/Histone-lysine N-methyltransferase SETDB1 (NuRD/TRIM28/HDACs/SETDB1) histone methyltransferase, which is primarily involved in regulation of the pluripotency of embryonic stem cells and its differentiation. The complex is normally activated by binding of Krueppel-associated box zinc-finger proteins (KRAB-ZFPs) to specific DNA motifs, causing methylation of H3 to Lysin-9 residues (H3K9). Our data showed that Strip2 binds to a DNA motif (20 base pairs), like the KRAB-ZFPs. We establish that Strip2 is an epigenetic regulator of pluripotency and differentiation by modulating DNA KRAB-ZFPs as well as the NuRD/TRIM28/HDACs/SETDB1 histone methyltransferase complex.

Identifiers

PMID36335090
PMCPMC9637104
OpenAlexW4308263967

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.