Evidence map›Paper›PMID 36333783›Full record

ArticleCancer cell international2022

Identification of long non-coding RNA using single nucleotide epimutation analysis: a novel gene discovery approach.

Mohammad Amin Kerachian, Marjan Azghandi

Open access · goldAbstract read
In one paragraph

Article in Cancer cell international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 3 countries.

Mohammad Amin KerachianMedical Genetics Research Center, Mashhad University of Medical Sciences, Mashhad, Iran. amin.kerachian@mail.mcgill.ca.ORCID http://orcid.org/0000-0001-5016-2882
Marjan AzghandiCancer Genetics Research Unit, Reza Radiotherapy and Oncology Center, Mashhad, Iran.
Imam Reza Hospital · IRMashhad University of Medical Sciences · IR

Funding

Mashhad University of Medical Sciences 991511
6 · The paper itself

Abstract

backgroundLong non-coding RNAs (lncRNAs) are involved in a variety of mechanisms related to tumorigenesis by functioning as oncogenes or tumor-suppressors or even harboring oncogenic and tumor-suppressing effects; representing a new class of cancer biomarkers and therapeutic targets. It is predicted that more than 35,000 ncRNA especially lncRNA are positioned at the intergenic regions of the human genome. Emerging research indicates that one of the key pathways controlling lncRNA expression and tissue specificity is epigenetic regulation.

methodsIn the current article, a novel approach for lncRNA discovery based on the intergenic position of most lncRNAs and a single CpG site methylation level representing epigenetic characteristics has been suggested.

resultsUsing this method, a novel antisense lncRNA named LINC02892 presenting three transcripts without the capacity of coding a protein was found exhibiting nuclear, cytoplasmic, and exosome distributions.

conclusionThe current discovery strategy could be applied to identify novel non-coding RNAs influenced by methylation aberrations.

Indexed as

DiscoveryEpigeneticExosomeIntergenicLINC02892Long non-coding RNA

Identifiers

PMID36333783
PMCPMC9636742
OpenAlexW4308169929

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.