Evidence map›Paper›PMID 36333360›Full record

ArticleScientific reports2022

Deciphering sex-specific miRNAs as heat-recorders in zebrafish.

Tosca A van Gelderen, Jérôme Montfort, José Antonio Álvarez-Dios, Violette Thermes, Francesc Piferrer, Julien Bobe, Laia Ribas

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Consequences of Cancer on ZebrafishEcology and evolution · 2025
    Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Tosca A van GelderenInstitut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (ICM-CSIC), 08003, Barcelona, Spain.
Jérôme MontfortLaboratoire de Physiologie et Génomique des Poissons, INRAE, Rennes, France.
José Antonio Álvarez-DiosDepartamento de Matemática Aplicada, Facultad de Matemáticas, Universidad de Santiago de Compostela, 15781, Santiago de Compostela, Spain.
Violette ThermesLaboratoire de Physiologie et Génomique des Poissons, INRAE, Rennes, France.
Francesc PiferrerInstitut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (ICM-CSIC), 08003, Barcelona, Spain.
Julien BobeLaboratoire de Physiologie et Génomique des Poissons, INRAE, Rennes, France.
Laia RibasInstitut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (ICM-CSIC), 08003, Barcelona, Spain. lribas@icm.csic.es.
Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRFish Physiology and Genomics Institute · FRInstitut Català de Ciències del Clima · ESInstitut de Ciències del Mar · ESUniversidade de Santiago de Compostela · ESUniversitat Autònoma de Barcelona · ES

Funding

Agencia Estatal de Investigación PID2019-108888RB-I00Consejo Superior de Investigaciones Científicas 02030E004Ministerio de Ciencia e Innovación 2PID2020-113781RB-I00Ministerio de Economía, Industria y Competitividad, Gobierno de España AGL2015-73864-JIN
6 · The paper itself

Abstract

In the last decade, a plethora of microRNAs (miRNAs) has been reported in a wide variety of physiological processes, including reproduction, in many aquatic organisms. However, miRNAome alterations occurred by environmental cues due to water temperature increment have not yet been elucidated. With the aim to identify epigenetic regulations mediated by miRNAs in the gonads in a climate change scenario, the animal model zebrafish (Danio rerio) were subjected to high temperatures during sex differentiation, a treatment that results in male-skewed sex ratios in the adulthood. Once the fish reached adulthood, gonads were sequenced by high-throughput technologies and a total of 23 and 1 differentially expressed miRNAs in ovaries and testes, respectively, were identified two months after the heat treatment. Most of these heat-recorder miRNAs were involved in human sex-related cancer and about 400 predicted-target genes were obtained, some with reproduction-related functions. Their synteny in the zebrafish genome was, for more than half of the predicted target genes, in the chromosomes 7, 2, 4, 3 and 11 in the ovaries, chromosome 4 being the place where the sex-associated-region (sar) is localized in wild zebrafish. Further, spatial localization in the gonads of two selected heat-recorder miRNAs (miR-122-5p and miR-146-5p) showed exclusive expression in the ovarian germ cells. The present study expands the catalog of sex-specific miRNAs and deciphers, for the first time, thermosensitive miRNAs in the zebrafish gonads that might be used as potential epimarkers to predict environmental past events.

Indexed as

MicroRNAsZebrafishAdultAnimalsFemaleGene Expression ProfilingGonadsHot TemperatureHumansMaleSex DifferentiationMicroRNAs

Identifiers

PMID36333360
PMCPMC9636255
OpenAlexW4308192222

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.