Evidence map›Paper›PMID 36332606›Full record

ArticleMolecular cell2022

Structural and functional basis of mammalian microRNA biogenesis by Dicer.

David Zapletal, Eliska Taborska, Josef Pasulka, Radek Malik, Karel Kubicek, Martina Zanova, Christian Much, Marek Sebesta, Valeria Buccheri, Filip Horvat and 11 more

Open access · hybridAbstract readComment
In one paragraph

Article in Molecular cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
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  8. Review
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  12. Review
  13. Cancers · 2025
    Review
  14. Article
  15. Biochemical and structural basis of Dicer helicase function unveiled by resurrecting ancient proteins.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Review
  17. Review
  18. Article
  19. The biogenesis and regulation of animal microRNAs.Nature reviews. Molecular cell biology · 2025
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 6 countries.

David ZapletalCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic; National Centre for Biomolecular Research, Faculty of Science, Masaryk University, 625 00 Brno, Czech Republic.
Eliska TaborskaInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Josef PasulkaInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Radek MalikInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Karel KubicekCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic; Institute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Martina ZanovaCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.
Christian MuchCentre for Regenerative Medicine, Institute for Regeneration and Repair, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh, 5 Little France Drive, Edinburgh EH16 4UU, UK; European Molecular Biology Laboratory (EMBL), Mouse Biology Unit, Via Ramarini 32, Monterotondo Scalo 00015, Italy.
Marek SebestaCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.
Valeria BuccheriInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Filip HorvatInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic; Bioinformatics Group, Department of Biology, Faculty of Science, University of Zagreb, Horvatovac 102a, 10000 Zagreb, Croatia.
Irena JenickovaCzech Centre for Phenogenomics and Laboratory of Transgenic Models of Diseases, Institute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Prumyslova 595, 252 50 Vestec, Czech Republic.
Michaela ProchazkovaCzech Centre for Phenogenomics and Laboratory of Transgenic Models of Diseases, Institute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Prumyslova 595, 252 50 Vestec, Czech Republic.
Jan ProchazkaCzech Centre for Phenogenomics and Laboratory of Transgenic Models of Diseases, Institute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Prumyslova 595, 252 50 Vestec, Czech Republic.
Matyas PinkasCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.
Jiri NovacekCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.
Diego F JosephInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic.
Radislav SedlacekCzech Centre for Phenogenomics and Laboratory of Transgenic Models of Diseases, Institute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Prumyslova 595, 252 50 Vestec, Czech Republic.
Carrie BerneckyInstitute of Science and Technology Austria (ISTA), Am Campus 1, 3400 Klosterneuburg, Austria.
Dónal O'CarrollCentre for Regenerative Medicine, Institute for Regeneration and Repair, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh, 5 Little France Drive, Edinburgh EH16 4UU, UK; European Molecular Biology Laboratory (EMBL), Mouse Biology Unit, Via Ramarini 32, Monterotondo Scalo 00015, Italy; Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, UK.
Richard SteflCEITEC-Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic; National Centre for Biomolecular Research, Faculty of Science, Masaryk University, 625 00 Brno, Czech Republic. Electronic address: richard.stefl@ceitec.muni.cz.
Petr SvobodaInstitute of Molecular Genetics of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague 4, Czech Republic. Electronic address: svobodap@img.cas.cz.
Central European Institute of Technology · CZCzech Academy of Sciences · CZCzech Academy of Sciences, Institute of Molecular Genetics · CZMRC Centre for Regenerative Medicine · GBInstitute of Science and Technology Austria · ATUniversity of Zagreb · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNA (miRNA) and RNA interference (RNAi) pathways rely on small RNAs produced by Dicer endonucleases. Mammalian Dicer primarily supports the essential gene-regulating miRNA pathway, but how it is specifically adapted to miRNA biogenesis is unknown. We show that the adaptation entails a unique structural role of Dicer's DExD/H helicase domain. Although mice tolerate loss of its putative ATPase function, the complete absence of the domain is lethal because it assures high-fidelity miRNA biogenesis. Structures of murine Dicer•-miRNA precursor complexes revealed that the DExD/H domain has a helicase-unrelated structural function. It locks Dicer in a closed state, which facilitates miRNA precursor selection. Transition to a cleavage-competent open state is stimulated by Dicer-binding protein TARBP2. Absence of the DExD/H domain or its mutations unlocks the closed state, reduces substrate selectivity, and activates RNAi. Thus, the DExD/H domain structurally contributes to mammalian miRNA biogenesis and underlies mechanistical partitioning of miRNA and RNAi pathways.

Indexed as

MicroRNAsRibonuclease IIIAnimalsCarrier ProteinsMammalsMiceRNA InterferenceCarrier ProteinsMicroRNAsRibonuclease IIIcryo-EMDExDDicerdsRBDdsRNAhelicasemiRNAmirtronPKRRNAiTARBP2

Identifiers

PMID36332606
PMCPMC9645528
OpenAlexW4308074152

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.