Evidence map›Paper›PMID 36331239›Full record

ArticleJCO precision oncology2022

Development and Validation of a Breast Cancer Polygenic Risk Score on the Basis of Genetic Ancestry Composition.

Elisha Hughes, Susanne Wagner, Dmitry Pruss, Ryan Bernhisel, Braden Probst, Victor Abkevich, Timothy Simmons, Brooke Hullinger, Thaddeus Judkins, Eric Rosenthal and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in JCO precision oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Evaluation of Multiple Breast Cancer Polygenic Risk Score Panels in Women of Latin American Heritage.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
    Article
  6. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 9 institutions in 1 country.

Elisha HughesMyriad Genetics, Inc, Salt Lake City, UT.ORCID 0000-0002-3145-3913
Susanne WagnerMyriad Genetics, Inc, Salt Lake City, UT.
Dmitry PrussMyriad Genetics, Inc, Salt Lake City, UT.
Ryan BernhiselMyriad Genetics, Inc, Salt Lake City, UT.
Braden ProbstMyriad Genetics, Inc, Salt Lake City, UT.ORCID 0000-0002-4160-800X
Victor AbkevichMyriad Genetics, Inc, Salt Lake City, UT.
Timothy SimmonsMyriad Genetics, Inc, Salt Lake City, UT.
Brooke HullingerMyriad Genetics, Inc, Salt Lake City, UT.
Thaddeus JudkinsMyriad Genetics, Inc, Salt Lake City, UT.ORCID 0000-0003-2662-4658
Eric RosenthalMyriad Genetics, Inc, Salt Lake City, UT.
Benjamin RoaMyriad Genetics, Inc, Salt Lake City, UT.
Susan M DomchekBasser Center for BRCA, University of Pennsylvania, Philadelphia, PA.ORCID 0000-0002-5914-7272
Charis EngGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH.ORCID 0000-0002-3693-5145
Judy GarberDana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-9449-3982
Monique GaryGrand View Health, Sellersville, PA.
Jennifer KlempThe University of Kansas Cancer Center, The University of Kansas Medical Center, Kansas City, KS.ORCID 0000-0001-6918-5304
Semanti MukherjeeMemorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0002-1843-9359
Kenneth OffitMemorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0002-2180-2032
Olufunmilayo I OlopadeDepartment of Medicine, University of Chicago, Chicago, IL.ORCID 0000-0002-9936-1599
Joseph VijaiMemorial Sloan Kettering Cancer Center, New York, NY.ORCID 0000-0002-7933-151X
Jeffrey N WeitzelLatin American School of Oncology, Sierra Madre, CA.ORCID 0000-0001-6714-092X
Pat WhitworthNashville Breast Center, Nashville, TN.
Lamis YehiaGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH.ORCID 0000-0002-6389-3059
Ora GordonProvidence Health and Services, Renton, WA.
Holly PedersonMedical Breast Services, Cleveland Clinic, Cleveland, OH.ORCID 0000-0003-4325-8370
Allison KurianStanford University School of Medicine, Stanford, CA.ORCID 0000-0002-6175-9470
Thomas P SlavinMyriad Genetics, Inc, Salt Lake City, UT.
Alexander GutinMyriad Genetics, Inc, Salt Lake City, UT.
Jerry S LanchburyMyriad Genetics, Inc, Salt Lake City, UT.
Myriad Genetics · USCleveland Clinic · USMemorial Sloan Kettering Cancer Center · USDana-Farber Cancer Institute · USProvidence Health & Services · USStanford University · USThe University of Kansas Cancer Center · USUniversity of Chicago · USUniversity of Pennsylvania · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

purposePolygenic risk scores (PRSs) for breast cancer (BC) risk stratification have been developed primarily in women of European ancestry. Their application to women of non-European ancestry has lagged because of the lack of a formal approach to incorporate genetic ancestry and ancestry-dependent variant frequencies and effect sizes. Here, we propose a multiple-ancestry PRS (MA-PRS) that addresses these issues and may be useful in the development of equitable PRSs across other cancers and common diseases. MATERIALS AND

methodsWomen referred for hereditary cancer testing were divided into consecutive cohorts for development (n = 189,230) and for independent validation (n = 89,126). Individual genetic composition as fractions of three reference ancestries (African, East Asian, and European) was determined from ancestry-informative single-nucleotide polymorphisms. The MA-PRS is a combination of three ancestry-specific PRSs on the basis of genetic ancestral composition. Stratification of risk was evaluated by multivariable logistic regression models controlling for family cancer history. Goodness-of-fit analysis compared expected with observed relative risks by quantiles of the MA-PRS distribution.

resultsIn independent validation, the MA-PRS was significantly associated with BC risk in the full cohort (odds ratio, 1.43; 95% CI, 1.40 to 1.46;

conclusionThe MA-PRS uses genetic ancestral composition to expand the utility of polygenic risk prediction to non-European women. Inclusion of genetic ancestry in polygenic risk prediction presents an opportunity for more personalized treatment decisions for women of varying and mixed ancestries.

Indexed as

Breast NeoplasmsFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMultifactorial InheritanceRisk Factors

Identifiers

PMID36331239
PMCPMC9666117
OpenAlexW4308434527

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.