Evidence map›Paper›PMID 36331148›Full record

ArticleMolecular genetics & genomic medicine2022

Identification of nine novel variants across PAX3, SOX10, EDNRB, and MITF genes in Waardenburg syndrome with next-generation sequencing.

Chen-Yu Lee, Ming-Yu Lo, You-Mei Chen, Pei-Hsuan Lin, Chuan-Jen Hsu, Pei-Lung Chen, Chen-Chi Wu, Jacob Shujui Hsu

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Mild features of partialFrontiers in pediatrics · 2025
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  4. A novel frameshift variant ofFrontiers in genetics · 2025
    Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Chen-Yu LeeDepartment of Otolaryngology, National Taiwan University Hospital, Hsinchu Branch, Hsinchu, Taiwan.ORCID 0000-0002-9041-7023
Ming-Yu LoDepartment of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
You-Mei ChenDepartment of Medical Genetics, National Taiwan University Hospital, Taipei, Taiwan.
Pei-Hsuan LinDepartment of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
Chuan-Jen HsuDepartment of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
Pei-Lung ChenGraduate Institute of Medical Genomics and Proteomics, College of Medicine, National Taiwan University, Taipei, Taiwan.
Chen-Chi WuDepartment of Otolaryngology, National Taiwan University Hospital, Taipei, Taiwan.
Jacob Shujui HsuGraduate Institute of Medical Genomics and Proteomics, College of Medicine, National Taiwan University, Taipei, Taiwan.ORCID 0000-0001-7358-5343
National Taiwan University Hospital · TWNational Taiwan University · TWBuddhist Tzu Chi General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWaardenburg syndrome (WS) is a hereditary, genetically heterogeneous disorder characterized by variable presentations of sensorineural hearing impairment and pigmentation anomalies. This study aimed to investigate the clinical features of WS in detail and determine the genetic causes of patients with clinically suspected WS.

methodsA total of 24 patients from 21 Han-Taiwanese families were enrolled and underwent comprehensive physical and audiological examinations. We applied targeted next-generation sequencing (NGS) to investigate the potential causative variants in these patients and further validated the candidate variants through Sanger sequencing.

resultsWe identified 19 causative variants of WS in our cohort. Of these variants, nine were novel and discovered in PAX3, SOX10, EDNRB, and MITF genes, including missense, nonsense, deletion, and splice site variants. Several patients presented with skeletal deformities, hypotonia, megacolon, and neurological disorders that were rarely seen in WS.

conclusionThis study revealed highly phenotypic variability in Taiwanese WS patients and demonstrated that targeted NGS allowed us to clarify the genetic diagnosis and extend the genetic variant spectrum of WS.

Indexed as

Waardenburg SyndromeExonsHigh-Throughput Nucleotide SequencingHumansMicrophthalmia-Associated Transcription FactorMutationPAX3 Transcription FactorReceptor, Endothelin BSOXE Transcription FactorsEDNRB protein, humanMicrophthalmia-Associated Transcription FactorMITF protein, humanPAX3 protein, humanPAX3 Transcription FactorReceptor, Endothelin BSOX10 protein, humanSOXE Transcription FactorsEDNRBMITFnext-generation sequencingPAX3SOX10Waardenburg syndrome

Identifiers

PMID36331148
PMCPMC9747560
OpenAlexW4308183555

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.