Evidence map›Paper›PMID 36331073›Full record

ArticleJournal of animal science2023

Exploring differentially expressed genes in hypothalamic, pars tuberalis and pineal gland transcriptomes in different sexual behavior phenotypes in rams using RNA-Seq.

Kenza Lakhssassi, María Pilar Sarto, Belén Marín, Belén Lahoz, José Folch, José Luis Alabart, Malena Serrano, Jorge Hugo Calvo

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Article in Journal of animal science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Kenza LakhssassiAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.
María Pilar SartoAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.
Belén MarínCentre for Encephalopathies and Emerging Transmissible Diseases, Faculty of Veterinary Medicine, University of Zaragoza, 50018 Zaragoza, Spain.
Belén LahozAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.
José FolchAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.
José Luis AlabartAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.
Malena SerranoDepartment of Animal Breeding and Genetics, INIA-CSIC, 28040 Madrid, Spain.
Jorge Hugo CalvoAgrifood Research and Technology Centre of Aragon-IA2, 50059 Zaragoza, Spain.ORCID 0000-0001-9513-0219
Centro de Investigación y Tecnología Agroalimentaria de Aragón · ESFundacion Agencia Aragonesa para la Investigacion y el Desarrollo · ESUniversidad de Zaragoza · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reproductive seasonality is a limiting factor in sheep production. Sexual behavior is a key element in reproductive efficiency, and this function is regulated by the hypothalamus-pituitary-gonadal (HPG) axis. To understand the mechanisms of sexual behavior, transcriptomic sequencing technology was used to identify differentially expressed genes (DEGs) in the hypothalamus (HT), pars tuberalis (PT) and pineal gland (PG) in Rasa Aragonesa rams with different sexual behavior. Bioinformatics analysis of the 16,401 identified genes by RNA-Seq revealed 103 and 12 DEGs in the HT and the PG, respectively, at a false discovery rate (FDR) of 5% with an absolute value of expression ≥ 1 (log2FC). However, no DEGs were found in the PT. Functional annotation and pathway enrichment analysis showed that DEGs of HT were enriched mainly in neuroactive ligand-receptor interactions and signaling pathways, including notable candidate genes such as MTNR1A, CHRNA2, FSHB, LHB, GNRHR, AVP, PRL, PDYN, CGA, GABRD, and TSHB, which play a crucial role in sexual behavior. The GnRH and cAMP signaling pathways were also highlighted. In addition, gene set enrichment analysis (GSEA) identified potential pathways, dominated mainly by biological process category, that could be responsible for the differences in sexual behavior observed in rams. The intracellular protein transport and pattern specification process were enriched within the PT and the transcription factor binding and protein ubiquitination pathways for the PG. Thus, these pathways together may play an important role in the regulation of the sexual behavior in Rasa Aragonesa rams through the hypothalamic-pituitary-gonadal axis. The validation of 5 DEGs using reverse transcription quantitative polymerase chain reaction (RT-qPCR) showed expression patterns like the found with RNA-Seq. Overall, these results contribute to understanding the genomic basis of sexual behavior in rams. Our study demonstrates that multiple networks and pathways orchestrate sexual behavior in sheep.

Indexed as

Pineal GlandTranscriptomeAnimalsGene Expression ProfilingHypothalamusMalePhenotypeRNA-SeqSheepSheep, Domestichypothalamuspineal glandramsexual behaviortranscriptome

Identifiers

PMID36331073
PMCPMC9833037
OpenAlexW4308180160

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.