Evidence map›Paper›PMID 36330405›Full record

ArticleAnnals of translational medicine2022

Entity relation extraction in the medical domain: based on data augmentation.

Anli Wang, Linyi Li, Xuehong Wu, Jianping Zhu, Shanshan Yu, Xi Chen, Jianhua Li, Hongtao Zhu

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Article in Annals of translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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2 citing papers in PubMed.

  1. A review of reinforcement learning for natural language processing and applications in healthcare.Journal of the American Medical Informatics Association : JAMIA · 2024
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5 · Who and what money

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8 authors.

Anli WangInformation Center, The Third Xiangya Hospital, Central South University, Changsha, China.
Linyi LiSchool of Computer Science, Central South University, Changsha, China.
Xuehong WuSchool of Computer Science, Central South University, Changsha, China.
Jianping ZhuHunan Creator Information Technology Co., Ltd., Changsha, China.
Shanshan YuInformation Center, The Third Xiangya Hospital, Central South University, Changsha, China.
Xi ChenInformation and Network Center, The Second Xiangya Hospital, Central South University, Changsha, China.
Jianhua LiHunan Creator Information Technology Co., Ltd., Changsha, China.
Hongtao ZhuInformation and Network Center, The Second Xiangya Hospital, Central South University, Changsha, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Entity relation extraction is an important task in the construction of professional knowledge graphs in the medical field. Research on entity relation extraction for academic books in the medical field has revealed that there is a great difference in the number of different entity relations, which has led to the formation of a typical unbalanced data set that is difficult to recognize but has certain research value. Methods: In this article, we propose a new entity relation extraction method based on data augmentation. According to the distribution of individual entity relation classes in the data set, the probability of whether a text is augmented during training was calculated. In text-oriented data augmentation, different augmentation methods perform differently in different language environments. The reinforcement of learning determines which data augmentation method to use in the current language environment. This strategy was applied to the entity relation extraction of the medical professional book, Results: The deep-learning model using data augmentation was better than the model without data augmentation, as data augmentation significantly improved the evaluation indicators of the relation classes with low data volumes in the unbalanced data set and slightly improved the evaluation indicators of the relation classes with sufficient features and large data volumes. Additionally, the deep-learning model using reinforcement learning-based data augmentation was superior to the deep-learning model using traditional data augmentation. We found that after the application of reinforcement learning-based data augmentation, the evaluation indicators of the multiple relation classes were much better than those to which reinforcement learning-based data augmentation had not been applied. Conclusions: For unbalanced data sets, data augmentation can effectively improve the ability of the deep-learning model to obtain data features, and reinforcement learning-based data augmentation can further enhance this ability. Our experiments confirmed the superiority of reinforcement learning-based data augmentation.

Indexed as

Data augmentationmedical entity and relation extractionreinforcement learningunbalanced data set

Identifiers

PMID36330405
PMCPMC9622485

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