Evidence map›Paper›PMID 36329122›Full record

ArticleScientific reports2022

Sampling from four geographically divergent young female populations demonstrates forensic geolocation potential in microbiomes.

Thomas Clarke, Lauren Brinkac, Chris Greco, Angela T Alleyne, Patricio Carrasco, Carolina Inostroza, Tiiseto Tau, Wichaya Wisitrasameewong, Manolito G Torralba, Karen Nelson and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Microbial genomics: a potential toolkit for forensic investigations.Forensic science, medicine, and pathology · 2025
    Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Thomas ClarkeJ. Craig Venter Institute, Rockville, MD, 20850, USA.
Lauren BrinkacJ. Craig Venter Institute, Rockville, MD, 20850, USA.
Chris GrecoJ. Craig Venter Institute, Rockville, MD, 20850, USA.
Angela T AlleyneDepartment of Biological & Chemical Sciences, Faculty of Science and Technology, The University of the West Indies, Cave Hill Campus, Bridgetown, Barbados.
Patricio CarrascoFaculty of Dentistry, Centro de Investigación en Biología y Regeneración Oral (CIBRO), Universidad de los Andes, Santiago, Chile.
Carolina InostrozaFaculty of Dentistry, Centro de Investigación en Biología y Regeneración Oral (CIBRO), Universidad de los Andes, Santiago, Chile.
Tiiseto TauDepartment of Virology, Sefako Makgatho Health Sciences University, Pretoria, South Africa.
Wichaya WisitrasameewongDepartment of Periodontology, Faculty of Dentistry, Chulalongkorn University, Bangkok, Thailand.
Manolito G TorralbaJ. Craig Venter Institute, Rockville, MD, 20850, USA.
Karen NelsonJ. Craig Venter Institute, Rockville, MD, 20850, USA.
Harinder SinghJ. Craig Venter Institute, Rockville, MD, 20850, USA. hsingh@jcvi.org.

Funding

National Institute of Justice 2015-R2-CX-K036
6 · The paper itself

Abstract

Studies of human microbiomes using new sequencing techniques have increasingly demonstrated that their ecologies are partly determined by the lifestyle and habits of individuals. As such, significant forensic information could be obtained from high throughput sequencing of the human microbiome. This approach, combined with multiple analytical techniques demonstrates that bacterial DNA can be used to uniquely identify an individual and to provide information about their life and behavioral patterns. However, the transformation of these findings into actionable forensic information, including the geolocation of the samples, remains limited by incomplete understanding of the effects of confounding factors and the paucity of diverse sequences. We obtained 16S rRNA sequences of stool and oral microbiomes collected from 206 young and healthy females from four globally diverse populations, in addition to supporting metadata, including dietary and medical information. Analysis of these microbiomes revealed detectable geolocation signals between the populations, even for populations living within the same city. Accounting for other lifestyle variables, such as diet and smoking, lessened but does not remove the geolocation signal.

Indexed as

MicrobiotaDNA, BacterialFecesFemaleHumansRNA, Ribosomal, 16SSpecimen HandlingDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID36329122
PMCPMC9633824

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.