Evidence map›Paper›PMID 36326957›Full record

ArticleBiotechnology letters2022

AmyJ33, a truncated amylase with improved catalytic properties.

Sarahi Hernández-Heredia, Julián Mario Peña-Castro, María Guadalupe Aguilar-Uscanga, Clarita Olvera, Cirilo Nolasco-Hipólito, Sandra Del Moral

Abstract read
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In one paragraph

Article in Biotechnology letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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  4. Frontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sarahi Hernández-HerediaNational Institute of Technology of Mexico/Veracruz Institute of Technology/Food Research and Development Unit, Ma. Quevedo 2779, CP 91897, Veracruz, Veracruz, Mexico.
Julián Mario Peña-CastroInstitute of Biotechnology, University of Papaloapan, Circuito Central 200, CP 68301, Tuxtepec, Oaxaca, Mexico.
María Guadalupe Aguilar-UscangaNational Institute of Technology of Mexico/Veracruz Institute of Technology/Food Research and Development Unit, Ma. Quevedo 2779, CP 91897, Veracruz, Veracruz, Mexico.
Clarita OlveraInstitute of Biotechnology, National Autonomous University of Mexico, Av. Universidad 2001, CP 62210, Cuernavaca, Morelos, Mexico.
Cirilo Nolasco-HipólitoInstitute of Biotechnology, University of Papaloapan, Circuito Central 200, CP 68301, Tuxtepec, Oaxaca, Mexico.
Sandra Del MoralResearcher for Mexico-National Council for Science and Technology, Food Research and Development Unit, National Institute of Technology of Mexico/Veracruz Institute of Technology, Quevedo 2779, CP 91897, Veracruz, Veracruz, Mexico. sandit.dmv@gmail.com.ORCID http://orcid.org/0000-0001-8815-0465
Instituto Tecnologico de Veracruz · MXUniversidad del Papaloapan · MXUniversidad Nacional Autónoma de México · MX

Funding

CONACyT 002026
6 · The paper itself

Abstract

Biochemical and kinetic properties are of special interest for the specific applications of α-amylases in industrial sectors such as textile industries, detergents, biofuels and food among others. Therefore, protein engineering is currently directed towards a continuous demand to improve the properties of amylases and thus meet the specific characteristics for various industrial sectors. In the present work, modular protein engineering was performed to improve the biochemical and kinetic properties of AmyJ33r an α-amylase isolated from Bacillus siamensis JJC33M consisting of five domains, A, B, C, D and E (SBD) (Montor-Antonio et al. in 3 Biotech 7:336, 2017. https://doi.org/10.1007/s13205-017-0954-8 ). AmyJ33r is not active on native starch, only showing activity on gelatinized starch. At the C-terminal, AmyJ33r has a starch binding domain (SBD, domain E) belonging to the CBM26 family. In this study, four truncated versions were constructed and expressed in E. coli (AmyJ33-AB, AmyJ33-ABC, AmyJ33-ABCD, and SBD) to determine the role of the A, B, C, D, and E domains in the biochemical behavior of AmyJ33r on starch. Biochemical and kinetic characterization of the truncated versions showed that domain C is essential for catalysis; domain D improved enzyme activity at alkaline pH values, is also involved negatively in thermostability at 40, 50, and 60 °C and its presence favored the production of maltooligosaccharides with a higher degree of polymerization (DP4). E domain have interaction with raw starch, also the deletion of E domain (SBD) favors the affinity for the substrate while the deletion of D domain increased enzyme k

Indexed as

AmylasesEscherichia colialpha-AmylasesBiocatalysisCatalysisStarchalpha-AmylasesAmylasesStarchBacillus siamensis JJC33MC-terminalDomain CStarch binding domainα-amylase

Identifiers

PMID36326957
OpenAlexW4308058544

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.