Evidence map›Paper›PMID 36325988›Full record

ArticleJournal of cell science2022

Stress-induced phase separation of ERES components into Sec bodies precedes ER exit inhibition in mammalian cells.

Wessel van Leeuwen, Dan T M Nguyen, Rianne Grond, Tineke Veenendaal, Catherine Rabouille, Ginny G Farías

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

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  17. ULK/Atg1: phasing in and out of autophagy.Trends in biochemical sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wessel van LeeuwenHubrecht Institute of the KNAW & UMC Utrecht, Utrecht 3584 CT, The Netherlands.
Dan T M NguyenCell Biology, Neurobiology and Biophysics. Department of Biology, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands.ORCID 0000-0001-9034-1826
Rianne GrondHubrecht Institute of the KNAW & UMC Utrecht, Utrecht 3584 CT, The Netherlands.
Tineke VeenendaalSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht 3584 CX, The Netherlands.
Catherine RabouilleHubrecht Institute of the KNAW & UMC Utrecht, Utrecht 3584 CT, The Netherlands.ORCID 0000-0002-3663-9717
Ginny G FaríasCell Biology, Neurobiology and Biophysics. Department of Biology, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands.ORCID 0000-0002-7376-9692
University Medical Center Utrecht · NLUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phase separation of components of ER exit sites (ERES) into membraneless compartments, the Sec bodies, occurs in Drosophila cells upon exposure to specific cellular stressors, namely, salt stress and amino acid starvation, and their formation is linked to the early secretory pathway inhibition. Here, we show Sec bodies also form in secretory mammalian cells upon the same stress. These reversible and membraneless structures are positive for ERES components, including both Sec16A and Sec16B isoforms and COPII subunits. We find that Sec16A, but not Sec16B, is a driver for Sec body formation, and that the coalescence of ERES components into Sec bodies occurs by fusion. Finally, we show that the stress-induced coalescence of ERES components into Sec bodies precedes ER exit inhibition, leading to their progressive depletion from ERES that become non-functional. Stress relief causes an immediate dissolution of Sec bodies and the concomitant restoration of ER exit. We propose that the dynamic conversion between ERES and Sec body assembly, driven by Sec16A, regulates protein exit from the ER during stress and upon stress relief in mammalian cells, thus providing a conserved pro-survival mechanism in response to stress.

Indexed as

COP-Coated VesiclesEndoplasmic ReticulumAnimalsGolgi ApparatusMammalsProtein TransportSecretory PathwayVesicular Transport ProteinsVesicular Transport ProteinsEarly secretory pathwayERES remodelingER exit sitesMammalian cellsPhase separationProtein transportSec16Sec bodyStress

Identifiers

PMID36325988
PMCPMC10112967
OpenAlexW4308054829

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.