Evidence map›Paper›PMID 36323732›Full record

ArticleScientific reports2022

Discovery and structural characterization of chicoric acid as a SARS-CoV-2 nucleocapsid protein ligand and RNA binding disruptor.

Gustavo Fernando Mercaldi, Eduardo Henrique Salviano Bezerra, Fernanda Aparecida Heleno Batista, Celisa Caldana Costa Tonoli, Adriana Santos Soprano, Jacqueline Farinha Shimizu, Alice Nagai, Jaqueline Cristina da Silva, Helder Veras Ribeiro Filho, Jéssica do Nascimento Faria and 15 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. How does NMR support SARS-CoV-2 protein-ligand interaction studies?Analytical and bioanalytical chemistry · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 3 institutions in 1 country.

Gustavo Fernando Mercaldi *Brazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Eduardo Henrique Salviano Bezerra *Brazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Fernanda Aparecida Heleno Batista *Brazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Celisa Caldana Costa TonoliBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Adriana Santos SopranoBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Jacqueline Farinha ShimizuBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Alice NagaiBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Jaqueline Cristina da SilvaBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Helder Veras Ribeiro FilhoBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Jéssica do Nascimento FariaBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Marcos Guilherme da CunhaBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Ana Carolina Mattos ZeriBrazilian Synchrotron Light Source (LNLS), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Andrey Fabricio Ziem NascimentoBrazilian Synchrotron Light Source (LNLS), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
José Luiz Proenca-ModenaLaboratory of Emerging Viruses (LEVE), Department of Genetics, Evolution, Microbiology and Immunology, Institute of Biology, University of Campinas (UNICAMP), Campinas, SP, Brazil.
Marcio Chaim BajgelmanBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Silvana Aparecida RoccoBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Paulo Sérgio Lopes-de-OliveiraBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Artur Torres CordeiroBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Marjorie BruderBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Rafael Elias MarquesBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Mauricio Luis SforçaBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Kleber Gomes FranchiniBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Celso Eduardo BenedettiBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil.
Ana Carolina Migliorini FigueiraBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil. ana.figueira@lnbio.cnpem.br.
Daniela Barretto Barbosa TrivellaBrazilian Biosciences National Laboratory (LNBio), Brazilian Centre for Research in Energy and Materials (CNPEM), Campinas, SP, 13083-100, Brazil. daniela.trivella@lnbio.cnpem.br.
Brazilian Center for Research in Energy and Materials · BRBrazilian Biosciences National Laboratory · BRUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

Financiadora de Estudos e Projetos 01.20.0003.00
6 · The paper itself

Abstract

The nucleocapsid (N) protein plays critical roles in coronavirus genome transcription and packaging, representing a key target for the development of novel antivirals, and for which structural information on ligand binding is scarce. We used a novel fluorescence polarization assay to identify small molecules that disrupt the binding of the N protein to a target RNA derived from the SARS-CoV-2 genome packaging signal. Several phenolic compounds, including L-chicoric acid (CA), were identified as high-affinity N-protein ligands. The binding of CA to the N protein was confirmed by isothermal titration calorimetry,

Indexed as

COVID-19SARS-CoV-2Antiviral AgentsCaffeic AcidsHumansLigandsNucleocapsid ProteinsProtein BindingRNASuccinatesAntiviral AgentsCaffeic Acidschicoric acidLigandsNucleocapsid ProteinsRNASuccinates

Identifiers

PMID36323732
PMCPMC9628480
OpenAlexW4307923818

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.