Evidence map›Paper›PMID 36322821›Full record

ArticleGut microbes

Unique Pakistani gut microbiota highlights population-specific microbiota signatures of type 2 diabetes mellitus.

Afshan Saleem, Aamer Ikram, Evgenia Dikareva, Emilia Lahtinen, Dollwin Matharu, Anne-Maria Pajari, Willem M de Vos, Fariha Hasan, Anne Salonen, Ching Jian

Open access · goldAbstract read
In one paragraph

Article in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Afshan SaleemHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Aamer IkramDepartment of Virology, National Institute of Health, Islamabad, Pakistan.
Evgenia DikarevaHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Emilia LahtinenHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Dollwin MatharuHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Anne-Maria PajariDepartment of Food and Nutrition, University of Helsinki, Helsinki, Finland.
Willem M de VosHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Fariha HasanDepartment of Microbiology, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, Pakistan.
Anne SalonenHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.ORCID 0000-0002-6960-7447
Ching JianHuman Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.ORCID 0000-0003-0577-8834
University of Helsinki · FIQuaid-i-Azam University · PKNational Institute of Health · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biogeographic variations in the gut microbiota are pivotal to understanding the global pattern of host-microbiota interactions in prevalent lifestyle-related diseases. Pakistani adults, having an exceptionally high prevalence of type 2 diabetes mellitus (T2D), are one of the most understudied populations in microbiota research to date. The aim of the present study is to examine the gut microbiota across individuals from Pakistan and other populations of non-industrialized and industrialized lifestyles with a focus on T2D. The fecal samples from 94 urban-dwelling Pakistani adults with and without T2D were profiled by bacterial 16S ribosomal RNA gene and fungal internal transcribed spacer (ITS) region amplicon sequencing and eubacterial qPCR, and plasma samples quantified for circulating levels of lipopolysaccharide-binding protein (LBP) and the activation ability of Toll-like receptor (TLR)-signaling. Publicly available datasets generated with comparable molecular methods were retrieved for comparative analysis of the bacterial microbiota. Overall, urbanized Pakistanis' gut microbiota was similar to that of transitional or non-industrialized populations, depleted in

Indexed as

ActinobacteriaDiabetes Mellitus, Type 2Gastrointestinal MicrobiomeMicrobiotaAdultBacteriaHumansPakistanRNA, Ribosomal, 16SRNA, Ribosomal, 16Sgut microbiotaLifestylemetabolic diseasesprevotellarandom forestT2DToll-like receptorurbanization

Identifiers

PMID36322821
PMCPMC9635555
OpenAlexW4308145828

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.