Evidence map›Paper›PMID 36322569›Full record

ArticlePLoS neglected tropical diseases2022

Genomics and metagenomics of Madurella mycetomatis, a causative agent of black grain mycetoma in Sudan.

Anastasia P Litvintseva, Sahar Bakhiet, Lalitha Gade, Darlene D Wagner, Ujwal R Bagal, Dhwani Batra, Emily Norris, Lavanya Rishishwar, Karlyn D Beer, Emmanuel Edwar Siddig and 3 more

Abstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. A qPCR identification scheme to differentiate actinomycetoma from eumycetoma.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  2. Mycetoma.PLoS neglected tropical diseases · 2026
    Review
  3. The development of a multiplex recombinase polymerase amplification reaction to detect the most common causative agents of eumycetoma.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  4. Observational
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Anastasia P LitvintsevaMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.ORCID 0000-0003-1086-8041
Sahar BakhietThe Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan.
Lalitha GadeMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Darlene D WagnerIHRC Inc., Atlanta, Georgia, United States of America.
Ujwal R BagalASRT Inc. Atlanta, Georgia, United States of America.
Dhwani BatraOffice of Advanced Molecular Detection, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Emily NorrisApplied Bioinformatics Laboratory, Atlanta, Georgia, United States of America.
Lavanya RishishwarSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Karlyn D BeerMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Emmanuel Edwar SiddigThe Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan.
Najwa Adam MhmoudThe Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan.
Nancy A ChowMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Ahmed FahalThe Mycetoma Research Centre, University of Khartoum, Khartoum, Sudan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Madurella mycetomatis is one of the main causative agents of mycetoma, a debilitating neglected tropical disease. Improved understanding of the genomic diversity of the fungal and bacterial causes of mycetoma is essential to advances in diagnosis and treatment. Here, we describe a high-quality genome assembly of M. mycetomatis and results of the whole genome sequence analysis of 26 isolates from Sudan. We demonstrate evidence of at least seven genetically diverse lineages and extreme clonality among isolates within these lineages. We also performed shotgun metagenomic analysis of DNA extracted from mycetoma grains and showed that M. mycetomatis reads were detected in all sequenced samples with the average of 11,317 reads (s.d. +/- 21,269) per sample. In addition, 10 (12%) of the 81 tested grain samples contained bacterial reads including Streptococcus sp., Staphylococcus sp. and others.

Indexed as

MadurellaMycetomaGenomicsHumansMetagenomicsNeglected DiseasesSudan

Identifiers

PMID36322569
PMCPMC9629555

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.