Evidence map›Paper›PMID 36321068›Full record

ArticleEnvironmental advances2022

Testing specificity and sensitivity of wastewater-based epidemiology for detecting SARS-CoV-2 in four communities on Vancouver Island, Canada.

Nadia Zeina Masri, Kiffer George Card, Emmanuelle A Caws, Alana Babcock, Ryan Powell, Christopher J Lowe, Shelley Donovan, Shelley Norum, Shirley Lyons, Sean De Pol and 6 more

Abstract read
In one paragraph

Article in Environmental advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Nadia Zeina MasriDivision of Medical Sciences, University of Victoria, Victoria, BC V8W 2Y2, Canada.
Kiffer George CardFaculty of Health Sciences, Simon Fraser University, Canada.
Emmanuelle A CawsDepartment of Civil Engineering and Centre for Advanced Materials and Related Technologies (CAMTEC), University of Victoria, Canada.
Alana BabcockDivision of Medical Sciences, University of Victoria, Victoria, BC V8W 2Y2, Canada.
Ryan PowellRegional District of Nanaimo, Canada.
Christopher J LoweEnvironmental Monitoring Program, Capital Regional District, Canada.
Shelley DonovanEnvironmental Monitoring Program, Capital Regional District, Canada.
Shelley NorumRegional District of Nanaimo, Canada.
Shirley LyonsEnvironmental Monitoring Program, Capital Regional District, Canada.
Sean De PolRegional District of Nanaimo, Canada.
Lareina KostenchukPani Energy Inc., Canada.
Caetano DoreaDepartment of Civil Engineering and Centre for Advanced Materials and Related Technologies (CAMTEC), University of Victoria, Canada.
Nathan J LachowskySchool of Public Health and Social Policy, University of Victoria, Canada.
Stephanie M WillerthDepartment of Mechanical Engineering and Division of Medical Sciences, University of Victoria; Centre for Advanced Materials and Related Technologies (CAMTEC), University of Victoria, Canada.
Thomas M FylesPani Energy Inc., Canada.
Heather L BuckleyDepartment of Civil Engineering, Department of Chemistry, and Centre for Advanced Materials and Related Technologies (CAMTEC), University of Victoria, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report wastewater surveillance of the spread of SARS-CoV-2 based upon 24-h composite influent samples taken weekly from four wastewater treatment plants (WWTP) on Vancouver Island, BC, Canada between January 3, 2021 and July 10, 2021. Samples were analyzed by reverse transcription quantitative polymerase chain reaction targeting the N1 and N2 gene fragments of SARS-CoV-2 and a region of the replication associate protein of the pepper mottle mosaic virus (PMMoV) serving as endemic control. Only a small proportion of samples had quantifiable levels of N1 or N2. Overall case rates are weakly correlated with the concentration (gene copies/L) and with the flux of viral material influent to the WWTP (gene copies/day); the latter accounts for influent flow variations. Poisson multimodal rank correlation accounts for differences between the four WWTP and shows a significant correlation with a significant positive intercept. Receiver operator characteristics (ROC) analysis confirms a cut-off of cases based on amplified/not-amplified experimental data. At the optimal cut point of 19 (N1) or 17 (N2) cases/week/100,000 the sensitivity and specificity is about 75% for N1 and 67% for N2.

Indexed as

Pepper mild mottle virusqPCRSARS-CoV-2SensitivitySpecificityWastewater-based epidemiologyWastewater surveillance

Identifiers

PMID36321068
PMCPMC9613784

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.