Evidence map›Paper›PMID 36320504›Full record

ArticleRSC advances2022

Formation and evolution of C-C, C-O, C[double bond, length as m-dash]O and C-N bonds in chemical reactions of prebiotic interest.

Alejandro Arias, Sara Gómez, Natalia Rojas-Valencia, Francisco Núñez-Zarur, Chiara Cappelli, Juliana A Murillo-López, Albeiro Restrepo

Abstract read
In one paragraph

Article in RSC advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alejandro AriasInstituto de Química, Universidad de Antioquia UdeA Calle 70 No. 52-21 Medellín Colombia albeiro.restrepo@udea.edu.co.ORCID https://orcid.org/0000-0003-1088-3305
Sara GómezScuola Normale Superiore, Classe di Scienze Piazza dei Cavalieri 7 Pisa 56126 Italy sara.gomezmaya@sns.it.ORCID https://orcid.org/0000-0002-5430-9228
Natalia Rojas-ValenciaInstituto de Química, Universidad de Antioquia UdeA Calle 70 No. 52-21 Medellín Colombia albeiro.restrepo@udea.edu.co.ORCID https://orcid.org/0000-0002-7380-3010
Francisco Núñez-ZarurFacultad de Ciencias Básicas, Universidad de Medellín Carrera 87 No. 30-65 Medellín 050026 Colombia.ORCID https://orcid.org/0000-0002-9244-9328
Chiara CappelliScuola Normale Superiore, Classe di Scienze Piazza dei Cavalieri 7 Pisa 56126 Italy sara.gomezmaya@sns.it.ORCID https://orcid.org/0000-0002-4872-4505
Juliana A Murillo-LópezDepartamento de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello Autopista, Concepción-Talcahuano Talcahuano 7100 Chile.ORCID https://orcid.org/0000-0002-3351-4652
Albeiro RestrepoInstituto de Química, Universidad de Antioquia UdeA Calle 70 No. 52-21 Medellín Colombia albeiro.restrepo@udea.edu.co.ORCID https://orcid.org/0000-0002-7866-7791

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A series of prebiotic chemical reactions yielding the precursor building blocks of amino acids, proteins and carbohydrates, starting solely from HCN and water is studied here. We closely follow the formation and evolution of the pivotal C-C, C-O, C[double bond, length as m-dash]O, and C-N bonds, which dictate the chemistry of the molecules of life. In many cases, formation of these bonds is set in motion by proton transfers in which individual water molecules act as catalysts so that water atoms end up in the products. Our results indicate that the prebiotic formation of carbon dioxide, formaldehyde, formic acid, formaldimine, glycolaldehyde, glycine, glycolonitrile, and oxazole derivatives, among others, are best described as highly nonsynchronous concerted single step processes. Nonetheless, for all reactions involving double proton transfer, the formation and breaking of O-H bonds around a particular O atom occur in a synchronous fashion, apparently independently from other primitive processes. For the most part, the first process to initiate seems to be the double proton transfer in the reactions where they are present, then bond breaking/formation around the reactive carbon in the carbonyl group and finally rupture of the C-N bonds in the appropriate cases, which are the most reluctant to break. Remarkably, within the limitations of our non-dynamical computational model, the wide ranges of temperature and pressure in which these reactions occur, downplay the problematic determination of the exact constraints on the early Earth.

Identifiers

PMID36320504
PMCPMC9549586

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.